RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PSDA5PKW4 1024 aaPredicted RBP7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 PALM3A6NDB9 673 aaPredicted RBP7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 KCNA1Q09470 495 aa7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 ZNF428Q96B54 188 aa7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
RNU6-488P-201ENST00000515918 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
RNU6-488P-201ENST00000515918 MTMR2Q13614 643 aa7.29□□□□□ -1.24
RNU6-488P-201ENST00000515918 PRR7Q8TB68 274 aa7.29□□□□□ -1.24
RNU6-488P-201ENST00000515918 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
RNU6-488P-201ENST00000515918 LMOD1P29536 600 aaPredicted RBP7.28□□□□□ -1.24
RNU6-488P-201ENST00000515918 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
RNU6-488P-201ENST00000515918 PATL2C9JE40 543 aaKnown RBP7.27□□□□□ -1.25
RNU6-488P-201ENST00000515918 SWT1Q5T5J6 900 aaKnown RBP7.27□□□□□ -1.25
RNU6-488P-201ENST00000515918 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
RNU6-488P-201ENST00000515918 CDCA8Q53HL2 280 aa7.26□□□□□ -1.25
RNU6-488P-201ENST00000515918 RSPH4AQ5TD94 716 aa7.26□□□□□ -1.25
RNU6-488P-201ENST00000515918 HELBQ8NG08 1087 aaPredicted RBP7.26□□□□□ -1.25
RNU6-488P-201ENST00000515918 TSC1Q92574 1164 aa7.26□□□□□ -1.25
RNU6-488P-201ENST00000515918 SYMPKQ92797 1274 aaKnown RBP7.25□□□□□ -1.25
RNU6-488P-201ENST00000515918 KCNK17Q96T54 332 aa7.25□□□□□ -1.25
RNU6-488P-201ENST00000515918 ZBED2Q9BTP6 218 aa7.25□□□□□ -1.25
RNU6-488P-201ENST00000515918 C6orf229H3BNL8 230 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 POTEB2H3BUK9 544 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 ATG7O95352 703 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 FUT2Q10981 343 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 NR6A1Q15406 480 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 VRTNQ9H8Y1 702 aa7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
RNU6-488P-201ENST00000515918 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
RNU6-488P-201ENST00000515918 SOX11P35716 441 aa7.23□□□□□ -1.25
RNU6-488P-201ENST00000515918 SLF2Q8IX21 1173 aa7.23□□□□□ -1.25
RNU6-488P-201ENST00000515918 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
RNU6-488P-201ENST00000515918 HOXB1P14653 301 aaPredicted RBP7.21□□□□□ -1.26
RNU6-488P-201ENST00000515918 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
RNU6-488P-201ENST00000515918 SEPT9Q9UHD8 586 aaPredicted RBP7.21□□□□□ -1.26
RNU6-488P-201ENST00000515918 PSEN2P49810 448 aa7.2□□□□□ -1.26
RNU6-488P-201ENST00000515918 CFHP08603 1231 aa7.19□□□□□ -1.26
RNU6-488P-201ENST00000515918 ATP6V1AP38606 617 aa7.19□□□□□ -1.26
RNU6-488P-201ENST00000515918 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
RNU6-488P-201ENST00000515918 SND1Q7KZF4 910 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-488P-201ENST00000515918 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
RNU6-488P-201ENST00000515918 ATP9BO43861 1147 aa7.18□□□□□ -1.26
RNU6-488P-201ENST00000515918 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
RNU6-488P-201ENST00000515918 GRIPAP1Q4V328 841 aa7.18□□□□□ -1.26
RNU6-488P-201ENST00000515918 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
RNU6-488P-201ENST00000515918 POTEEQ6S8J3 1075 aa7.17□□□□□ -1.26
RNU6-488P-201ENST00000515918 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 EIF4G2P78344 907 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 RETREG3Q86VR2 466 aa7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 ZMIZ1Q9ULJ6 1067 aa7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
RNU6-488P-201ENST00000515918 HDGFP51858 240 aaKnown RBP7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 NR1H3Q13133 447 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 ELOAQ14241 798 aaKnown RBP7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 FAM98CQ17RN3 349 aaKnown RBP7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 MORN1Q5T089 497 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 DESI1Q6ICB0 168 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 LYPD8Q6UX82 237 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 SLC4A5Q9BY07 1137 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
RNU6-488P-201ENST00000515918 E9PSI1 815 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 TMEM164Q5U3C3 297 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 STK32AQ8WU08 396 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 SLC27A5Q9Y2P5 690 aa7.14□□□□□ -1.27
RNU6-488P-201ENST00000515918 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
RNU6-488P-201ENST00000515918 KCNH8Q96L42 1107 aa7.13□□□□□ -1.27
RNU6-488P-201ENST00000515918 SCUBE2Q9NQ36 999 aa7.13□□□□□ -1.27
RNU6-488P-201ENST00000515918 ZBBXA8MT70 800 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 ARHGAP33O14559 1287 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 IGSF3O75054 1194 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 TXNDC2Q86VQ3 553 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 NFATC2IPQ8NCF5 419 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
RNU6-488P-201ENST00000515918 LOC105371045A0A1W2PR82 267 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 ACTN4O43707 911 aaKnown RBP7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 SLC4A3P48751 1232 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 FKBPLQ9UIM3 349 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 VPS9D1Q9Y2B5 631 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 AXIN2Q9Y2T1 843 aa7.11□□□□□ -1.27
RNU6-488P-201ENST00000515918 USP17L3A6NCW0 530 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 USP17L4A6NCW7 530 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 SNPHO15079 494 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 Q3C1V9 767 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 RNF19BQ6ZMZ0 732 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 MAMSTRQ6ZN01 415 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 USP17L1Q7RTZ2 530 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
RNU6-488P-201ENST00000515918 UNCXA6NJT0 531 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms