RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
SFXN1-211ENST00000515736 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
SFXN1-211ENST00000515736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
SFXN1-211ENST00000515736 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
SFXN1-211ENST00000515736 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 NEO1Q92859 1461 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 RAD21O60216 631 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
SFXN1-211ENST00000515736 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
SFXN1-211ENST00000515736 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 ADAMTSL3P82987 1691 aa12.09□□□□□ -0.47
SFXN1-211ENST00000515736 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
SFXN1-211ENST00000515736 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
SFXN1-211ENST00000515736 BCORL1Q5H9F3 1711 aa12.07□□□□□ -0.48
SFXN1-211ENST00000515736 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
SFXN1-211ENST00000515736 EHBP1L1Q8N3D4 1523 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
SFXN1-211ENST00000515736 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 CFAP74Q9C0B2 1584 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
SFXN1-211ENST00000515736 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 SERPINA10Q9UK55 444 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 PTPRMP28827 1452 aa12.06□□□□□ -0.48
SFXN1-211ENST00000515736 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
SFXN1-211ENST00000515736 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
SFXN1-211ENST00000515736 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
SFXN1-211ENST00000515736 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
SFXN1-211ENST00000515736 RICTORQ6R327 1708 aa12.05□□□□□ -0.48
SFXN1-211ENST00000515736 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
SFXN1-211ENST00000515736 ZBTB7CA1YPR0 619 aa12.04□□□□□ -0.48
SFXN1-211ENST00000515736 GABBR2O75899 941 aa12.04□□□□□ -0.48
SFXN1-211ENST00000515736 C7P10643 843 aa12.04□□□□□ -0.48
SFXN1-211ENST00000515736 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
SFXN1-211ENST00000515736 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
SFXN1-211ENST00000515736 RFC5P40937 340 aa12.03□□□□□ -0.48
SFXN1-211ENST00000515736 FOSBP53539 338 aa12.03□□□□□ -0.48
SFXN1-211ENST00000515736 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
SFXN1-211ENST00000515736 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
SFXN1-211ENST00000515736 FANCAO15360 1455 aa12.02□□□□□ -0.48
SFXN1-211ENST00000515736 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
SFXN1-211ENST00000515736 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
SFXN1-211ENST00000515736 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
SFXN1-211ENST00000515736 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.49
SFXN1-211ENST00000515736 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
SFXN1-211ENST00000515736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
SFXN1-211ENST00000515736 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
SFXN1-211ENST00000515736 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
SFXN1-211ENST00000515736 TMEM259Q4ZIN3 620 aa11.99□□□□□ -0.49
SFXN1-211ENST00000515736 PPP2R2DQ66LE6 453 aa11.99□□□□□ -0.49
SFXN1-211ENST00000515736 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
SFXN1-211ENST00000515736 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
SFXN1-211ENST00000515736 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
SFXN1-211ENST00000515736 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
SFXN1-211ENST00000515736 NPM2Q86SE8 214 aaKnown RBP11.98□□□□□ -0.49
SFXN1-211ENST00000515736 LIMD1Q9UGP4 676 aa11.98□□□□□ -0.49
SFXN1-211ENST00000515736 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
SFXN1-211ENST00000515736 MYO5CQ9NQX4 1742 aa11.97□□□□□ -0.49
SFXN1-211ENST00000515736 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
SFXN1-211ENST00000515736 PRSS12P56730 875 aa11.97□□□□□ -0.49
SFXN1-211ENST00000515736 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
SFXN1-211ENST00000515736 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
SFXN1-211ENST00000515736 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
SFXN1-211ENST00000515736 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
SFXN1-211ENST00000515736 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.49
SFXN1-211ENST00000515736 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
SFXN1-211ENST00000515736 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
SFXN1-211ENST00000515736 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
SFXN1-211ENST00000515736 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
SFXN1-211ENST00000515736 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
SFXN1-211ENST00000515736 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
SFXN1-211ENST00000515736 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
SFXN1-211ENST00000515736 MLECQ14165 292 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
SFXN1-211ENST00000515736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
SFXN1-211ENST00000515736 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
SFXN1-211ENST00000515736 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
SFXN1-211ENST00000515736 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
SFXN1-211ENST00000515736 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
SFXN1-211ENST00000515736 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
SFXN1-211ENST00000515736 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms