RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PROSER2Q86WR7 435 aaPredicted RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 MRPL50Q8N5N7 158 aaKnown RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CHIC2Q9UKJ5 165 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 TRIM34Q9BYJ4 488 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 DDX11L8A8MPP1 907 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 DXOO77932 396 aaKnown RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CFHP08603 1231 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 LRCH3Q96II8 777 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 NDUFV2P19404 249 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NDUFB9Q9Y6M9 179 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 FAM205CA6NFA0 338 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 FDX1P10109 184 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 PTPRNQ16849 979 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 WASHC4Q2M389 1173 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 THSD4Q6ZMP0 1018 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 MPNDQ8N594 471 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NFATC2IPQ8NCF5 419 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NR1I2O75469 434 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 JUNDP17535 347 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 ANKK1Q8NFD2 765 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 PCDHB15Q9Y5E8 787 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 CFAP99D6REC4 459 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 SRPK2P78362 688 aaKnown RBP3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 IRF5Q13568 498 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 PRM3Q9NNZ6 103 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 QPCTQ16769 361 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 ALG2Q9H553 416 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 LZTS3O60299 673 aaPredicted RBP3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 USP17L8P0C7I0 530 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 FMNL1O95466 1100 aaPredicted RBP3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 APLP1P51693 650 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 ZNF592Q92610 1267 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 SNRKQ9NRH2 765 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 SERPINA10Q9UK55 444 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 RDH13Q8NBN7 331 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 USB1Q9BQ65 265 aaKnown RBP3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 C1orf115Q9H7X2 142 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 SMAPO00193 183 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 FUT2Q10981 343 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 ELOAQ14241 798 aaKnown RBP3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 TJAP1Q5JTD0 557 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 AXIN2Q9Y2T1 843 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 PPP4CP60510 307 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 FAM160A2Q8N612 972 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 ARMC2Q8NEN0 867 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 NLRP7Q8WX94 980 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 RNF166Q96A37 237 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 SLC27A5Q9Y2P5 690 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 WNT2BQ93097 391 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 MARVELD3Q96A59 401 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 EVA1BQ9NVM1 165 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 POLR3EQ9NVU0 708 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PPP1R15AO75807 674 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PLEKHM2Q8IWE5 1019 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PNMA1Q8ND90 353 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 CABLES1Q8TDN4 633 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 UBTFP17480 764 aaKnown RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PRR7Q8TB68 274 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 SEPT9Q9UHD8 586 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 ADH1BP00325 375 aa3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 PDXDC2PQ6P474 469 aa3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 TRMT44Q8IYL2 757 aaKnown RBP3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 WWC1Q8IX03 1113 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SCUBE3Q8IX30 993 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 HELBQ8NG08 1087 aaPredicted RBP3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 TRAIPQ9BWF2 469 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 C1QTNF2Q9BXJ5 285 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 IL21Q9HBE4 155 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 HPS5Q9UPZ3 1129 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 CTDSPL2Q05D32 466 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SH3BP5LQ7L8J4 393 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SH3RF1Q7Z6J0 888 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 PHTF2Q8N3S3 785 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 PDE4CQ08493 712 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 KCNH2Q12809 1159 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 RPIAP49247 311 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 POM121Q96HA1 1249 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 OCSTAMPQ9BR26 566 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 ZPR1O75312 459 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 RGS20O76081 388 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 NR1H3Q13133 447 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 HOMEZQ8IX15 550 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 BLOC1S3Q6QNY0 202 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 CLUAP1Q96AJ1 413 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 FKBPLQ9UIM3 349 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 ESPNB1AK53 854 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 RAD21O60216 631 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 HMX1Q9NP08 348 aaPredicted RBP3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 PCDHB3Q9Y5E6 796 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 BCAMP50895 628 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 HCSTQ9UBK5 93 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 GUCA2AQ02747 115 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 MAP4K5Q9Y4K4 846 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 RNF19BQ6ZMZ0 732 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 HLA-CQ95604 372 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 WBP1LQ9NX94 342 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 CDV3Q9UKY7 258 aaKnown RBP3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 AP1G2O75843 785 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 CCNYL3P0C7X3 344 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms