RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
TCOF1-214ENST00000515035 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
TCOF1-214ENST00000515035 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
TCOF1-214ENST00000515035 MBD3O95983 291 aa16.07■□□□□ 0.16
TCOF1-214ENST00000515035 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
TCOF1-214ENST00000515035 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
TCOF1-214ENST00000515035 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
TCOF1-214ENST00000515035 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
TCOF1-214ENST00000515035 TRIM5Q9C035 493 aa16.05■□□□□ 0.16
TCOF1-214ENST00000515035 AAMPQ13685 434 aa16.05■□□□□ 0.16
TCOF1-214ENST00000515035 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
TCOF1-214ENST00000515035 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
TCOF1-214ENST00000515035 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
TCOF1-214ENST00000515035 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
TCOF1-214ENST00000515035 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
TCOF1-214ENST00000515035 FYCO1Q9BQS8 1478 aa16.04■□□□□ 0.16
TCOF1-214ENST00000515035 CDC45O75419 566 aa16.04■□□□□ 0.16
TCOF1-214ENST00000515035 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
TCOF1-214ENST00000515035 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-214ENST00000515035 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
TCOF1-214ENST00000515035 EVA1CP58658 441 aa16.03■□□□□ 0.16
TCOF1-214ENST00000515035 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
TCOF1-214ENST00000515035 ERCC4Q92889 916 aaPredicted RBP16.02■□□□□ 0.16
TCOF1-214ENST00000515035 TSPY26PQ9H489 355 aa16.02■□□□□ 0.16
TCOF1-214ENST00000515035 CCDC191Q8NCU4 936 aa16.02■□□□□ 0.16
TCOF1-214ENST00000515035 WWC1Q8IX03 1113 aa16.02■□□□□ 0.16
TCOF1-214ENST00000515035 PRPF40AO75400 957 aaKnown RBP16.02■□□□□ 0.15
TCOF1-214ENST00000515035 SDF4Q9BRK5 362 aa16.02■□□□□ 0.15
TCOF1-214ENST00000515035 ROCK1Q13464 1354 aa16.02■□□□□ 0.15
TCOF1-214ENST00000515035 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-214ENST00000515035 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
TCOF1-214ENST00000515035 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
TCOF1-214ENST00000515035 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-214ENST00000515035 NAP1L1P55209 391 aaKnown RBP16.01■□□□□ 0.15
TCOF1-214ENST00000515035 LEKR1Q6ZMV7 388 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 PDILTQ8N807 584 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 FOSBP53539 338 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 RIPK4P57078 832 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 DCTN1Q14203 1278 aa16■□□□□ 0.15
TCOF1-214ENST00000515035 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 ESPNB1AK53 854 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 PSME1Q06323 249 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 TRDNQ13061 729 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-214ENST00000515035 CCDC7Q96M83 1385 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
TCOF1-214ENST00000515035 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-214ENST00000515035 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 ATF3P18847 181 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 RUNDC1Q96C34 613 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 KIF21BO75037 1637 aa15.98■□□□□ 0.15
TCOF1-214ENST00000515035 UQCRHLA0A096LP55 91 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 UQCRHP07919 91 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-214ENST00000515035 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
TCOF1-214ENST00000515035 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.15
TCOF1-214ENST00000515035 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
TCOF1-214ENST00000515035 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
TCOF1-214ENST00000515035 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
TCOF1-214ENST00000515035 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
TCOF1-214ENST00000515035 TEFQ10587 303 aa15.96■□□□□ 0.15
TCOF1-214ENST00000515035 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
TCOF1-214ENST00000515035 TTLL5Q6EMB2 1281 aa15.96■□□□□ 0.14
TCOF1-214ENST00000515035 SPC24Q8NBT2 197 aa15.96■□□□□ 0.14
TCOF1-214ENST00000515035 SAFBQ15424 915 aaKnown RBP eCLIP15.95■□□□□ 0.14
TCOF1-214ENST00000515035 NEK4P51957 841 aa15.95■□□□□ 0.14
TCOF1-214ENST00000515035 G3BP1Q13283 466 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■■■□ 24.7
TCOF1-214ENST00000515035 CCDC112Q8NEF3 446 aa15.95■□□□□ 0.14
TCOF1-214ENST00000515035 ERC2O15083 957 aa15.95■□□□□ 0.14
TCOF1-214ENST00000515035 SMC2O95347 1197 aa15.95■□□□□ 0.14
TCOF1-214ENST00000515035 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
TCOF1-214ENST00000515035 AXDND1Q5T1B0 1012 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-214ENST00000515035 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 CCP110O43303 1012 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 RABEP1Q15276 862 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 KINO60870 393 aaKnown RBP15.94■□□□□ 0.14
TCOF1-214ENST00000515035 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 FIBPO43427 364 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 MPNDQ8N594 471 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
TCOF1-214ENST00000515035 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
TCOF1-214ENST00000515035 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
TCOF1-214ENST00000515035 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
TCOF1-214ENST00000515035 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
TCOF1-214ENST00000515035 MCM2P49736 904 aa15.93■□□□□ 0.14
TCOF1-214ENST00000515035 G3V3G9 751 aa15.92■□□□□ 0.14
TCOF1-214ENST00000515035 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
TCOF1-214ENST00000515035 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
TCOF1-214ENST00000515035 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
TCOF1-214ENST00000515035 GNAI1P63096 354 aa15.91■□□□□ 0.14
TCOF1-214ENST00000515035 OFD1O75665 1012 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms