RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 C8orf37Q96NL8 207 aa23.69■■□□□ 1.38
SNCAIP-220ENST00000514497 KDM2AQ9Y2K7 1162 aa23.69■■□□□ 1.38
SNCAIP-220ENST00000514497 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
SNCAIP-220ENST00000514497 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
SNCAIP-220ENST00000514497 LAMC1P11047 1609 aa23.65■■□□□ 1.38
SNCAIP-220ENST00000514497 TRPM1Q7Z4N2 1603 aa23.64■■□□□ 1.38
SNCAIP-220ENST00000514497 PIK3C2GO75747 1445 aa23.63■■□□□ 1.37
SNCAIP-220ENST00000514497 ASXL1Q8IXJ9 1541 aa23.63■■□□□ 1.37
SNCAIP-220ENST00000514497 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
SNCAIP-220ENST00000514497 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
SNCAIP-220ENST00000514497 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
SNCAIP-220ENST00000514497 NBPF8Q3BBV2 869 aa23.61■■□□□ 1.37
SNCAIP-220ENST00000514497 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
SNCAIP-220ENST00000514497 C14orf93Q9H972 538 aaKnown RBP23.57■■□□□ 1.36
SNCAIP-220ENST00000514497 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
SNCAIP-220ENST00000514497 GPRASP1Q5JY77 1395 aa23.55■■□□□ 1.36
SNCAIP-220ENST00000514497 PIK3R4Q99570 1358 aa23.55■■□□□ 1.36
SNCAIP-220ENST00000514497 EP400Q96L91 3159 aa23.55■■□□□ 1.36
SNCAIP-220ENST00000514497 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
SNCAIP-220ENST00000514497 DCCP43146 1447 aa23.54■■□□□ 1.36
SNCAIP-220ENST00000514497 ADAMTS2O95450 1211 aa23.54■■□□□ 1.36
SNCAIP-220ENST00000514497 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
SNCAIP-220ENST00000514497 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
SNCAIP-220ENST00000514497 MST1RQ04912 1400 aa23.51■■□□□ 1.35
SNCAIP-220ENST00000514497 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
SNCAIP-220ENST00000514497 CCDC125Q86Z20 511 aa23.5■■□□□ 1.35
SNCAIP-220ENST00000514497 USP21Q9UK80 565 aa23.5■■□□□ 1.35
SNCAIP-220ENST00000514497 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
SNCAIP-220ENST00000514497 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
SNCAIP-220ENST00000514497 TRPC5Q9UL62 973 aaPredicted RBP23.49■■□□□ 1.35
SNCAIP-220ENST00000514497 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
SNCAIP-220ENST00000514497 ADGRB1O14514 1584 aa23.46■■□□□ 1.35
SNCAIP-220ENST00000514497 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
SNCAIP-220ENST00000514497 NBPF1Q3BBV0 1214 aa23.45■■□□□ 1.34
SNCAIP-220ENST00000514497 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
SNCAIP-220ENST00000514497 XRN1Q8IZH2 1706 aaKnown RBP23.41■■□□□ 1.34
SNCAIP-220ENST00000514497 ATRNO75882 1429 aa23.41■■□□□ 1.34
SNCAIP-220ENST00000514497 LRP5O75197 1615 aa23.41■■□□□ 1.34
SNCAIP-220ENST00000514497 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
SNCAIP-220ENST00000514497 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
SNCAIP-220ENST00000514497 SLC24A1O60721 1099 aa23.39■■□□□ 1.33
SNCAIP-220ENST00000514497 USP47Q96K76 1375 aa23.38■■□□□ 1.33
SNCAIP-220ENST00000514497 KNDC1Q76NI1 1749 aa23.37■■□□□ 1.33
SNCAIP-220ENST00000514497 PTCH1Q13635 1447 aa23.37■■□□□ 1.33
SNCAIP-220ENST00000514497 YTHDC2Q9H6S0 1430 aaKnown RBP23.37■■□□□ 1.33
SNCAIP-220ENST00000514497 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
SNCAIP-220ENST00000514497 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
SNCAIP-220ENST00000514497 DLC1Q96QB1 1528 aa23.35■■□□□ 1.33
SNCAIP-220ENST00000514497 SIRT1Q96EB6 747 aa23.35■■□□□ 1.33
SNCAIP-220ENST00000514497 NALCNQ8IZF0 1738 aa23.34■■□□□ 1.33
SNCAIP-220ENST00000514497 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
SNCAIP-220ENST00000514497 METP08581 1390 aa23.34■■□□□ 1.33
SNCAIP-220ENST00000514497 TECPR2O15040 1411 aa23.33■■□□□ 1.33
SNCAIP-220ENST00000514497 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.33
SNCAIP-220ENST00000514497 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.32
SNCAIP-220ENST00000514497 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.32
SNCAIP-220ENST00000514497 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
SNCAIP-220ENST00000514497 SOS2Q07890 1332 aaPredicted RBP23.3■■□□□ 1.32
SNCAIP-220ENST00000514497 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
SNCAIP-220ENST00000514497 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
SNCAIP-220ENST00000514497 DEFB132Q7Z7B7 95 aa23.29■■□□□ 1.32
SNCAIP-220ENST00000514497 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
SNCAIP-220ENST00000514497 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
SNCAIP-220ENST00000514497 BCL9LQ86UU0 1499 aa23.28■■□□□ 1.32
SNCAIP-220ENST00000514497 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
SNCAIP-220ENST00000514497 TRAK1Q9UPV9 953 aa23.27■■□□□ 1.32
SNCAIP-220ENST00000514497 ST20-MTHFSA0A0A6YYL1 179 aa23.26■■□□□ 1.31
SNCAIP-220ENST00000514497 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
SNCAIP-220ENST00000514497 BRWD3Q6RI45 1802 aa23.25■■□□□ 1.31
SNCAIP-220ENST00000514497 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
SNCAIP-220ENST00000514497 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
SNCAIP-220ENST00000514497 STK26Q9P289 416 aa23.24■■□□□ 1.31
SNCAIP-220ENST00000514497 QRICH2Q9H0J4 1663 aa23.24■■□□□ 1.31
SNCAIP-220ENST00000514497 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
SNCAIP-220ENST00000514497 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
SNCAIP-220ENST00000514497 POGKQ9P215 609 aa23.21■■□□□ 1.31
SNCAIP-220ENST00000514497 TESK2Q96S53 571 aa23.2■■□□□ 1.3
SNCAIP-220ENST00000514497 PSDA5PKW4 1024 aaPredicted RBP23.19■■□□□ 1.3
SNCAIP-220ENST00000514497 GLI3P10071 1580 aa23.18■■□□□ 1.3
SNCAIP-220ENST00000514497 CDCA8Q53HL2 280 aa23.18■■□□□ 1.3
SNCAIP-220ENST00000514497 PRAM1Q96QH2 718 aa23.18■■□□□ 1.3
SNCAIP-220ENST00000514497 TMF1P82094 1093 aa23.17■■□□□ 1.3
SNCAIP-220ENST00000514497 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
SNCAIP-220ENST00000514497 PUS7Q96PZ0 661 aaKnown RBP23.16■■□□□ 1.3
SNCAIP-220ENST00000514497 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
SNCAIP-220ENST00000514497 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
SNCAIP-220ENST00000514497 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
SNCAIP-220ENST00000514497 EVC2Q86UK5 1308 aa23.11■■□□□ 1.29
SNCAIP-220ENST00000514497 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
SNCAIP-220ENST00000514497 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
SNCAIP-220ENST00000514497 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
SNCAIP-220ENST00000514497 SLIT2O94813 1529 aa23.08■■□□□ 1.29
SNCAIP-220ENST00000514497 PLEKHH1Q9ULM0 1364 aa23.08■■□□□ 1.29
SNCAIP-220ENST00000514497 PXDNQ92626 1479 aa23.08■■□□□ 1.29
SNCAIP-220ENST00000514497 BAG6P46379 1132 aa23.07■■□□□ 1.28
SNCAIP-220ENST00000514497 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
SNCAIP-220ENST00000514497 XPCQ01831 940 aaPredicted RBP23.06■■□□□ 1.28
SNCAIP-220ENST00000514497 YY1P25490 414 aa23.05■■□□□ 1.28
SNCAIP-220ENST00000514497 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNCAIP-220ENST00000514497 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms