RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
CALCOCO2-222ENST00000514006 POTEB2H3BUK9 544 aa8.65□□□□□ -1.02
CALCOCO2-222ENST00000514006 SNPHO15079 494 aa8.65□□□□□ -1.02
CALCOCO2-222ENST00000514006 RFX1P22670 979 aa8.65□□□□□ -1.02
CALCOCO2-222ENST00000514006 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
CALCOCO2-222ENST00000514006 ZBED2Q9BTP6 218 aa8.65□□□□□ -1.02
CALCOCO2-222ENST00000514006 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
CALCOCO2-222ENST00000514006 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
CALCOCO2-222ENST00000514006 TMCO4Q5TGY1 634 aa8.64□□□□□ -1.03
CALCOCO2-222ENST00000514006 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
CALCOCO2-222ENST00000514006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.63□□□□□ -1.03
CALCOCO2-222ENST00000514006 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
CALCOCO2-222ENST00000514006 GPR37L1O60883 481 aa8.63□□□□□ -1.03
CALCOCO2-222ENST00000514006 CFAP70Q5T0N1 1121 aa8.63□□□□□ -1.03
CALCOCO2-222ENST00000514006 GZF1Q9H116 711 aaPredicted RBP8.63□□□□□ -1.03
CALCOCO2-222ENST00000514006 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
CALCOCO2-222ENST00000514006 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
CALCOCO2-222ENST00000514006 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
CALCOCO2-222ENST00000514006 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
CALCOCO2-222ENST00000514006 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
CALCOCO2-222ENST00000514006 FUT2Q10981 343 aa8.61□□□□□ -1.03
CALCOCO2-222ENST00000514006 ALG2Q9H553 416 aa8.61□□□□□ -1.03
CALCOCO2-222ENST00000514006 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-222ENST00000514006 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
CALCOCO2-222ENST00000514006 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-222ENST00000514006 CFHP08603 1231 aa8.59□□□□□ -1.03
CALCOCO2-222ENST00000514006 SOX11P35716 441 aa8.59□□□□□ -1.03
CALCOCO2-222ENST00000514006 PSEN2P49810 448 aa8.59□□□□□ -1.03
CALCOCO2-222ENST00000514006 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
CALCOCO2-222ENST00000514006 BRD1O95696 1058 aa8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
CALCOCO2-222ENST00000514006 MFAP1P55081 439 aaKnown RBP8.57□□□□□ -1.04
CALCOCO2-222ENST00000514006 KCNA1Q09470 495 aa8.57□□□□□ -1.04
CALCOCO2-222ENST00000514006 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
CALCOCO2-222ENST00000514006 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
CALCOCO2-222ENST00000514006 SLC4A5Q9BY07 1137 aa8.57□□□□□ -1.04
CALCOCO2-222ENST00000514006 NR6A1Q15406 480 aa8.56□□□□□ -1.04
CALCOCO2-222ENST00000514006 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
CALCOCO2-222ENST00000514006 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
CALCOCO2-222ENST00000514006 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
CALCOCO2-222ENST00000514006 RNF40O75150 1001 aa8.55□□□□□ -1.04
CALCOCO2-222ENST00000514006 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
CALCOCO2-222ENST00000514006 UCN2Q96RP3 112 aa8.55□□□□□ -1.04
CALCOCO2-222ENST00000514006 TFIP11Q9UBB9 837 aaKnown RBP8.55□□□□□ -1.04
CALCOCO2-222ENST00000514006 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
CALCOCO2-222ENST00000514006 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO2-222ENST00000514006 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
CALCOCO2-222ENST00000514006 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
CALCOCO2-222ENST00000514006 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
CALCOCO2-222ENST00000514006 Q3C1V9 767 aa8.52□□□□□ -1.05
CALCOCO2-222ENST00000514006 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
CALCOCO2-222ENST00000514006 LAPTM4BQ86VI4 370 aa8.52□□□□□ -1.05
CALCOCO2-222ENST00000514006 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-222ENST00000514006 ATG7O95352 703 aa8.51□□□□□ -1.05
CALCOCO2-222ENST00000514006 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
CALCOCO2-222ENST00000514006 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
CALCOCO2-222ENST00000514006 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
CALCOCO2-222ENST00000514006 CARNS1A5YM72 827 aa8.5□□□□□ -1.05
CALCOCO2-222ENST00000514006 MORN1Q5T089 497 aa8.5□□□□□ -1.05
CALCOCO2-222ENST00000514006 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-222ENST00000514006 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
CALCOCO2-222ENST00000514006 ERBB3P21860 1342 aa8.5□□□□□ -1.05
CALCOCO2-222ENST00000514006 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
CALCOCO2-222ENST00000514006 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
CALCOCO2-222ENST00000514006 TBC1D9Q6ZT07 1266 aa8.49□□□□□ -1.05
CALCOCO2-222ENST00000514006 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
CALCOCO2-222ENST00000514006 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
CALCOCO2-222ENST00000514006 ATP9BO43861 1147 aa8.48□□□□□ -1.05
CALCOCO2-222ENST00000514006 PBX2P40425 430 aa8.48□□□□□ -1.05
CALCOCO2-222ENST00000514006 NR1H3Q13133 447 aa8.48□□□□□ -1.05
CALCOCO2-222ENST00000514006 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
CALCOCO2-222ENST00000514006 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
CALCOCO2-222ENST00000514006 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
CALCOCO2-222ENST00000514006 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-222ENST00000514006 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
CALCOCO2-222ENST00000514006 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-222ENST00000514006 ZFRQ96KR1 1074 aaKnown RBP8.47□□□□□ -1.05
CALCOCO2-222ENST00000514006 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
CALCOCO2-222ENST00000514006 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO2-222ENST00000514006 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
CALCOCO2-222ENST00000514006 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
CALCOCO2-222ENST00000514006 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
CALCOCO2-222ENST00000514006 FBXO45P0C2W1 286 aa8.44□□□□□ -1.06
CALCOCO2-222ENST00000514006 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
CALCOCO2-222ENST00000514006 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
CALCOCO2-222ENST00000514006 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-222ENST00000514006 FKBPLQ9UIM3 349 aa8.44□□□□□ -1.06
CALCOCO2-222ENST00000514006 BHMG1C9JSJ3 638 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-222ENST00000514006 RNF19BQ6ZMZ0 732 aa8.43□□□□□ -1.06
CALCOCO2-222ENST00000514006 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-222ENST00000514006 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
CALCOCO2-222ENST00000514006 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-222ENST00000514006 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 ELOAQ14241 798 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 CCDC27Q2M243 656 aa8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms