RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
CLDND1-229ENST00000513988 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
CLDND1-229ENST00000513988 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
CLDND1-229ENST00000513988 AMOTL2Q9Y2J4 779 aa12.51□□□□□ -0.41
CLDND1-229ENST00000513988 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
CLDND1-229ENST00000513988 MYOM2P54296 1465 aa12.51□□□□□ -0.41
CLDND1-229ENST00000513988 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-229ENST00000513988 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
CLDND1-229ENST00000513988 EHBP1L1Q8N3D4 1523 aa12.5□□□□□ -0.41
CLDND1-229ENST00000513988 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
CLDND1-229ENST00000513988 TRPM2O94759 1503 aa12.49□□□□□ -0.41
CLDND1-229ENST00000513988 UTRNP46939 3433 aa12.49□□□□□ -0.41
CLDND1-229ENST00000513988 LAMC1P11047 1609 aa12.48□□□□□ -0.41
CLDND1-229ENST00000513988 ADAMTS13Q76LX8 1427 aa12.48□□□□□ -0.41
CLDND1-229ENST00000513988 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 A0A0G2JS52 829 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 SLC34A2O95436 690 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 MYT1Q01538 1121 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
CLDND1-229ENST00000513988 CHD4Q14839 1912 aa12.47□□□□□ -0.41
CLDND1-229ENST00000513988 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
CLDND1-229ENST00000513988 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
CLDND1-229ENST00000513988 SLIT2O94813 1529 aa12.46□□□□□ -0.42
CLDND1-229ENST00000513988 KCNQ2O43526 872 aa12.45□□□□□ -0.42
CLDND1-229ENST00000513988 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLDND1-229ENST00000513988 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
CLDND1-229ENST00000513988 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
CLDND1-229ENST00000513988 ONECUT3O60422 494 aaPredicted RBP12.44□□□□□ -0.42
CLDND1-229ENST00000513988 POLA2Q14181 598 aa12.44□□□□□ -0.42
CLDND1-229ENST00000513988 C1orf167Q5SNV9 1468 aa12.44□□□□□ -0.42
CLDND1-229ENST00000513988 ADGRL3Q9HAR2 1447 aa12.44□□□□□ -0.42
CLDND1-229ENST00000513988 MYO5BQ9ULV0 1848 aa12.44□□□□□ -0.42
CLDND1-229ENST00000513988 KANK1Q14678 1352 aa12.43□□□□□ -0.42
CLDND1-229ENST00000513988 NOS1P29475 1434 aa12.43□□□□□ -0.42
CLDND1-229ENST00000513988 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
CLDND1-229ENST00000513988 VPS72Q15906 364 aa12.42□□□□□ -0.42
CLDND1-229ENST00000513988 NBPF8Q3BBV2 869 aa12.41□□□□□ -0.42
CLDND1-229ENST00000513988 NBPF14Q5TI25 921 aa12.41□□□□□ -0.42
CLDND1-229ENST00000513988 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
CLDND1-229ENST00000513988 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
CLDND1-229ENST00000513988 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
CLDND1-229ENST00000513988 ADGRB2O60241 1585 aa12.4□□□□□ -0.42
CLDND1-229ENST00000513988 CEP162Q5TB80 1403 aa12.4□□□□□ -0.42
CLDND1-229ENST00000513988 PARD3Q8TEW0 1356 aa12.4□□□□□ -0.42
CLDND1-229ENST00000513988 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.43
CLDND1-229ENST00000513988 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
CLDND1-229ENST00000513988 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
CLDND1-229ENST00000513988 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
CLDND1-229ENST00000513988 LMTK2Q8IWU2 1503 aa12.37□□□□□ -0.43
CLDND1-229ENST00000513988 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
CLDND1-229ENST00000513988 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
CLDND1-229ENST00000513988 TMEM131LA2VDJ0 1609 aa12.36□□□□□ -0.43
CLDND1-229ENST00000513988 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
CLDND1-229ENST00000513988 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
CLDND1-229ENST00000513988 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
CLDND1-229ENST00000513988 PTPN23Q9H3S7 1636 aa12.35□□□□□ -0.43
CLDND1-229ENST00000513988 APBA3O96018 575 aa12.34□□□□□ -0.43
CLDND1-229ENST00000513988 RREB1Q92766 1687 aa12.34□□□□□ -0.43
CLDND1-229ENST00000513988 NRKQ7Z2Y5 1582 aa12.34□□□□□ -0.43
CLDND1-229ENST00000513988 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
CLDND1-229ENST00000513988 KIF15Q9NS87 1388 aa12.33□□□□□ -0.44
CLDND1-229ENST00000513988 TRIM37O94972 964 aa12.33□□□□□ -0.44
CLDND1-229ENST00000513988 PXDNQ92626 1479 aa12.33□□□□□ -0.44
CLDND1-229ENST00000513988 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
CLDND1-229ENST00000513988 HSPA6P17066 643 aa12.32□□□□□ -0.44
CLDND1-229ENST00000513988 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-229ENST00000513988 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-229ENST00000513988 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
CLDND1-229ENST00000513988 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
CLDND1-229ENST00000513988 PRELPP51888 382 aa12.31□□□□□ -0.44
CLDND1-229ENST00000513988 ADGRL2O95490 1459 aa12.31□□□□□ -0.44
CLDND1-229ENST00000513988 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
CLDND1-229ENST00000513988 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
CLDND1-229ENST00000513988 RRP7BPQ9NSQ0 103 aa12.29□□□□□ -0.44
CLDND1-229ENST00000513988 MYOM1P52179 1685 aa12.29□□□□□ -0.44
CLDND1-229ENST00000513988 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
CLDND1-229ENST00000513988 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
CLDND1-229ENST00000513988 METP08581 1390 aa12.28□□□□□ -0.44
CLDND1-229ENST00000513988 FOXO3O43524 673 aa12.27□□□□□ -0.45
CLDND1-229ENST00000513988 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
CLDND1-229ENST00000513988 LRPPRCP42704 1394 aaKnown RBP12.26□□□□□ -0.45
CLDND1-229ENST00000513988 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
CLDND1-229ENST00000513988 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
CLDND1-229ENST00000513988 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
CLDND1-229ENST00000513988 TNS4Q8IZW8 715 aa12.25□□□□□ -0.45
CLDND1-229ENST00000513988 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
CLDND1-229ENST00000513988 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
CLDND1-229ENST00000513988 GPR162Q16538 588 aa12.24□□□□□ -0.45
CLDND1-229ENST00000513988 SPATA31A3Q5VYP0 1347 aa12.24□□□□□ -0.45
CLDND1-229ENST00000513988 PTGER2P43116 358 aa12.23□□□□□ -0.45
CLDND1-229ENST00000513988 CASZ1Q86V15 1759 aa12.23□□□□□ -0.45
CLDND1-229ENST00000513988 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
CLDND1-229ENST00000513988 CABLES1Q8TDN4 633 aa12.21□□□□□ -0.45
CLDND1-229ENST00000513988 THSD7AQ9UPZ6 1657 aa12.21□□□□□ -0.45
CLDND1-229ENST00000513988 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
CLDND1-229ENST00000513988 NEXMIFQ5QGS0 1516 aa12.2□□□□□ -0.46
CLDND1-229ENST00000513988 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
CLDND1-229ENST00000513988 BTG4Q9NY30 223 aa12.19□□□□□ -0.46
CLDND1-229ENST00000513988 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms