RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
VCAN-211ENST00000513984 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
VCAN-211ENST00000513984 CPS1P31327 1500 aa20.09■□□□□ 0.81
VCAN-211ENST00000513984 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
VCAN-211ENST00000513984 POGKQ9P215 609 aa20.09■□□□□ 0.81
VCAN-211ENST00000513984 SLIT1O75093 1534 aa20.09■□□□□ 0.81
VCAN-211ENST00000513984 TECPR2O15040 1411 aa20.08■□□□□ 0.81
VCAN-211ENST00000513984 CEBPAP49715 358 aaPredicted RBP20.08■□□□□ 0.8
VCAN-211ENST00000513984 SMG6Q86US8 1419 aaKnown RBP20.08■□□□□ 0.8
VCAN-211ENST00000513984 ARHGAP23Q9P227 1491 aa20.07■□□□□ 0.8
VCAN-211ENST00000513984 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
VCAN-211ENST00000513984 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
VCAN-211ENST00000513984 METP08581 1390 aa20.07■□□□□ 0.8
VCAN-211ENST00000513984 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
VCAN-211ENST00000513984 NEFLP07196 543 aa20.06■□□□□ 0.8
VCAN-211ENST00000513984 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
VCAN-211ENST00000513984 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
VCAN-211ENST00000513984 RIMS1Q86UR5 1692 aaKnown RBP20.05■□□□□ 0.8
VCAN-211ENST00000513984 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
VCAN-211ENST00000513984 FAM135BQ49AJ0 1406 aa20.05■□□□□ 0.8
VCAN-211ENST00000513984 FKBP8Q14318 412 aa20.04■□□□□ 0.8
VCAN-211ENST00000513984 NSD2O96028 1365 aa20.04■□□□□ 0.8
VCAN-211ENST00000513984 SRPK2P78362 688 aaKnown RBP20.04■□□□□ 0.8
VCAN-211ENST00000513984 CGNL1Q0VF96 1302 aa20.03■□□□□ 0.8
VCAN-211ENST00000513984 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
VCAN-211ENST00000513984 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
VCAN-211ENST00000513984 MED14O60244 1454 aa20.02■□□□□ 0.8
VCAN-211ENST00000513984 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
VCAN-211ENST00000513984 A0A1W2PP64 1363 aa20.02■□□□□ 0.8
VCAN-211ENST00000513984 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.79
VCAN-211ENST00000513984 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
VCAN-211ENST00000513984 KIF20BQ96Q89 1820 aa20■□□□□ 0.79
VCAN-211ENST00000513984 LTKP29376 864 aa19.99■□□□□ 0.79
VCAN-211ENST00000513984 WAPLQ7Z5K2 1190 aa19.99■□□□□ 0.79
VCAN-211ENST00000513984 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
VCAN-211ENST00000513984 SHPRHQ149N8 1683 aa19.99■□□□□ 0.79
VCAN-211ENST00000513984 CEP170BQ9Y4F5 1589 aaPredicted RBP19.99■□□□□ 0.79
VCAN-211ENST00000513984 POLR3AO14802 1390 aaPredicted RBP19.99■□□□□ 0.79
VCAN-211ENST00000513984 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
VCAN-211ENST00000513984 ADGRB2O60241 1585 aa19.98■□□□□ 0.79
VCAN-211ENST00000513984 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
VCAN-211ENST00000513984 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
VCAN-211ENST00000513984 ADAMTS8Q9UP79 889 aa19.97■□□□□ 0.79
VCAN-211ENST00000513984 ATP7BP35670 1465 aa19.97■□□□□ 0.79
VCAN-211ENST00000513984 MORC1Q86VD1 984 aa19.97■□□□□ 0.79
VCAN-211ENST00000513984 TXNDC2Q86VQ3 553 aa19.96■□□□□ 0.79
VCAN-211ENST00000513984 TERF2IPQ9NYB0 399 aa19.96■□□□□ 0.79
VCAN-211ENST00000513984 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
VCAN-211ENST00000513984 PDE3BQ13370 1112 aa19.95■□□□□ 0.78
VCAN-211ENST00000513984 BCANQ96GW7 911 aa19.95■□□□□ 0.78
VCAN-211ENST00000513984 THEMISQ8N1K5 641 aaPredicted RBP19.94■□□□□ 0.78
VCAN-211ENST00000513984 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
VCAN-211ENST00000513984 SENP3-EIF4A1A0A087X0R7 540 aa19.93■□□□□ 0.78
VCAN-211ENST00000513984 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
VCAN-211ENST00000513984 AKAP12Q02952 1782 aa19.92■□□□□ 0.78
VCAN-211ENST00000513984 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
VCAN-211ENST00000513984 MON2Q7Z3U7 1717 aa19.92■□□□□ 0.78
VCAN-211ENST00000513984 ITSN1Q15811 1721 aa19.91■□□□□ 0.78
VCAN-211ENST00000513984 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
VCAN-211ENST00000513984 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
VCAN-211ENST00000513984 HDGFL2Q7Z4V5 671 aaPredicted RBP19.9■□□□□ 0.78
VCAN-211ENST00000513984 PTPRUQ92729 1446 aa19.9■□□□□ 0.78
VCAN-211ENST00000513984 CABP1Q9NZU7 370 aa19.9■□□□□ 0.78
VCAN-211ENST00000513984 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
VCAN-211ENST00000513984 TOPAZ1Q8N9V7 1692 aa19.89■□□□□ 0.78
VCAN-211ENST00000513984 XRN1Q8IZH2 1706 aaKnown RBP19.89■□□□□ 0.77
VCAN-211ENST00000513984 ERICH6BQ5W0A0 696 aa19.89■□□□□ 0.77
VCAN-211ENST00000513984 TBX22Q9Y458 520 aa19.88■□□□□ 0.77
VCAN-211ENST00000513984 RNF123Q5XPI4 1314 aa19.88■□□□□ 0.77
VCAN-211ENST00000513984 CPSF1Q10570 1443 aaKnown RBP19.87■□□□□ 0.77
VCAN-211ENST00000513984 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
VCAN-211ENST00000513984 PPIP5K1Q6PFW1 1433 aa19.87■□□□□ 0.77
VCAN-211ENST00000513984 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
VCAN-211ENST00000513984 FYB1O15117 783 aa19.86■□□□□ 0.77
VCAN-211ENST00000513984 TNNT2P45379 298 aaPredicted RBP19.86■□□□□ 0.77
VCAN-211ENST00000513984 SLC26A8Q96RN1 970 aa19.85■□□□□ 0.77
VCAN-211ENST00000513984 MTHFSP49914 203 aa19.84■□□□□ 0.77
VCAN-211ENST00000513984 EDC4Q6P2E9 1401 aaKnown RBP19.83■□□□□ 0.77
VCAN-211ENST00000513984 ZNF521Q96K83 1311 aa19.83■□□□□ 0.77
VCAN-211ENST00000513984 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.76
VCAN-211ENST00000513984 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.76
VCAN-211ENST00000513984 IRX6P78412 446 aaPredicted RBP19.82■□□□□ 0.76
VCAN-211ENST00000513984 CFAP53Q96M91 514 aa19.82■□□□□ 0.76
VCAN-211ENST00000513984 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
VCAN-211ENST00000513984 COL3A1P02461 1466 aaPredicted RBP19.81■□□□□ 0.76
VCAN-211ENST00000513984 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
VCAN-211ENST00000513984 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
VCAN-211ENST00000513984 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
VCAN-211ENST00000513984 NRKQ7Z2Y5 1582 aa19.81■□□□□ 0.76
VCAN-211ENST00000513984 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
VCAN-211ENST00000513984 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
VCAN-211ENST00000513984 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
VCAN-211ENST00000513984 CCDC146Q8IYE0 955 aa19.79■□□□□ 0.76
VCAN-211ENST00000513984 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
VCAN-211ENST00000513984 PRR36Q9H6K5 1346 aa19.79■□□□□ 0.76
VCAN-211ENST00000513984 IQSEC2Q5JU85 1478 aa19.78■□□□□ 0.76
VCAN-211ENST00000513984 APAF1O14727 1248 aa19.76■□□□□ 0.75
VCAN-211ENST00000513984 RGPD8O14715 1765 aaPredicted RBP19.76■□□□□ 0.75
VCAN-211ENST00000513984 RCAN3Q9UKA8 241 aa19.75■□□□□ 0.75
VCAN-211ENST00000513984 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms