RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-204ENST00000513318 DLC1Q96QB1 1528 aa10.85□□□□□ -0.67
HMGXB3-204ENST00000513318 LTBP4Q8N2S1 1624 aa10.85□□□□□ -0.67
HMGXB3-204ENST00000513318 METP08581 1390 aa10.85□□□□□ -0.67
HMGXB3-204ENST00000513318 TECPR2O15040 1411 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 PTPRUQ92729 1446 aa10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 YTHDC2Q9H6S0 1430 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-204ENST00000513318 ROCK2O75116 1388 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-204ENST00000513318 GPRASP1Q5JY77 1395 aa10.83□□□□□ -0.68
HMGXB3-204ENST00000513318 NBPF8Q3BBV2 869 aa10.83□□□□□ -0.68
HMGXB3-204ENST00000513318 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
HMGXB3-204ENST00000513318 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
HMGXB3-204ENST00000513318 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
HMGXB3-204ENST00000513318 KCNA6P17658 529 aa10.81□□□□□ -0.68
HMGXB3-204ENST00000513318 ABCC11Q96J66 1382 aa10.8□□□□□ -0.68
HMGXB3-204ENST00000513318 TMEM132EQ6IEE7 984 aa10.8□□□□□ -0.68
HMGXB3-204ENST00000513318 PROM2Q8N271 834 aa10.8□□□□□ -0.68
HMGXB3-204ENST00000513318 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.8□□□□□ -0.68
HMGXB3-204ENST00000513318 LRRC7Q96NW7 1537 aa10.79□□□□□ -0.68
HMGXB3-204ENST00000513318 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
HMGXB3-204ENST00000513318 FAM135BQ49AJ0 1406 aa10.79□□□□□ -0.68
HMGXB3-204ENST00000513318 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
HMGXB3-204ENST00000513318 AMOTL2Q9Y2J4 779 aa10.79□□□□□ -0.68
HMGXB3-204ENST00000513318 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-204ENST00000513318 IQSEC2Q5JU85 1478 aa10.78□□□□□ -0.68
HMGXB3-204ENST00000513318 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
HMGXB3-204ENST00000513318 RGPD8O14715 1765 aaPredicted RBP10.77□□□□□ -0.68
HMGXB3-204ENST00000513318 NCOA3Q9Y6Q9 1424 aa10.77□□□□□ -0.68
HMGXB3-204ENST00000513318 ITSN1Q15811 1721 aa10.77□□□□□ -0.69
HMGXB3-204ENST00000513318 FMN2Q9NZ56 1722 aa10.77□□□□□ -0.69
HMGXB3-204ENST00000513318 CDC42BPGQ6DT37 1551 aa10.77□□□□□ -0.69
HMGXB3-204ENST00000513318 ROBO2Q9HCK4 1378 aa10.77□□□□□ -0.69
HMGXB3-204ENST00000513318 CARD11Q9BXL7 1154 aa10.76□□□□□ -0.69
HMGXB3-204ENST00000513318 STK26Q9P289 416 aa10.76□□□□□ -0.69
HMGXB3-204ENST00000513318 ADGRL3Q9HAR2 1447 aa10.75□□□□□ -0.69
HMGXB3-204ENST00000513318 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
HMGXB3-204ENST00000513318 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
HMGXB3-204ENST00000513318 TMEM94Q12767 1356 aa10.75□□□□□ -0.69
HMGXB3-204ENST00000513318 DCCP43146 1447 aa10.75□□□□□ -0.69
HMGXB3-204ENST00000513318 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-204ENST00000513318 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-204ENST00000513318 USP47Q96K76 1375 aa10.74□□□□□ -0.69
HMGXB3-204ENST00000513318 PLEKHH1Q9ULM0 1364 aa10.73□□□□□ -0.69
HMGXB3-204ENST00000513318 SBNO2Q9Y2G9 1366 aa10.73□□□□□ -0.69
HMGXB3-204ENST00000513318 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
HMGXB3-204ENST00000513318 CENPJQ9HC77 1338 aaPredicted RBP10.72□□□□□ -0.69
HMGXB3-204ENST00000513318 MSH6P52701 1360 aa10.72□□□□□ -0.69
HMGXB3-204ENST00000513318 TOPAZ1Q8N9V7 1692 aa10.72□□□□□ -0.69
HMGXB3-204ENST00000513318 USP32Q8NFA0 1604 aa10.71□□□□□ -0.69
HMGXB3-204ENST00000513318 POGKQ9P215 609 aa10.71□□□□□ -0.69
HMGXB3-204ENST00000513318 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
HMGXB3-204ENST00000513318 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
HMGXB3-204ENST00000513318 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
HMGXB3-204ENST00000513318 KIF1AQ12756 1690 aa10.69□□□□□ -0.7
HMGXB3-204ENST00000513318 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
HMGXB3-204ENST00000513318 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
HMGXB3-204ENST00000513318 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGXB3-204ENST00000513318 SAFB2Q14151 953 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGXB3-204ENST00000513318 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
HMGXB3-204ENST00000513318 ROBO1Q9Y6N7 1651 aa10.68□□□□□ -0.7
HMGXB3-204ENST00000513318 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-204ENST00000513318 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
HMGXB3-204ENST00000513318 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
HMGXB3-204ENST00000513318 MST1RQ04912 1400 aa10.67□□□□□ -0.7
HMGXB3-204ENST00000513318 MYOM1P52179 1685 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 ST20-MTHFSA0A0A6YYL1 179 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 ATP7BP35670 1465 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 ANKARQ7Z5J8 1434 aa10.66□□□□□ -0.7
HMGXB3-204ENST00000513318 ATF3P18847 181 aa10.65□□□□□ -0.7
HMGXB3-204ENST00000513318 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 TESK2Q96S53 571 aa10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 HIRIP3Q9BW71 556 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 MON2Q7Z3U7 1717 aa10.64□□□□□ -0.71
HMGXB3-204ENST00000513318 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
HMGXB3-204ENST00000513318 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
HMGXB3-204ENST00000513318 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
HMGXB3-204ENST00000513318 TOM1O60784 492 aa10.62□□□□□ -0.71
HMGXB3-204ENST00000513318 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-204ENST00000513318 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
HMGXB3-204ENST00000513318 DISP3Q9P2K9 1392 aa10.62□□□□□ -0.71
HMGXB3-204ENST00000513318 TMF1P82094 1093 aa10.61□□□□□ -0.71
HMGXB3-204ENST00000513318 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
HMGXB3-204ENST00000513318 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
HMGXB3-204ENST00000513318 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 SRPK2P78362 688 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 PUS7Q96PZ0 661 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 TRPM3Q9HCF6 1732 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
HMGXB3-204ENST00000513318 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
HMGXB3-204ENST00000513318 SLAIN2Q9P270 581 aa10.59□□□□□ -0.71
HMGXB3-204ENST00000513318 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms