RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 RUFY1Q96T51 708 aa20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 MNS1Q8NEH6 495 aa20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 NUCB2P80303 420 aa20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 GGNBP2Q9H3C7 697 aa20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 FAM43AQ8N2R8 423 aa20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 SAFBQ15424 915 aaKnown RBP eCLIP20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 RNF214Q8ND24 703 aa20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 CABP2Q9NPB3 220 aa20.96■□□□□ 0.95
ARHGEF28-212ENST00000513042 CWC22Q9HCG8 908 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-212ENST00000513042 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-212ENST00000513042 GNAI1P63096 354 aa20.95■□□□□ 0.94
ARHGEF28-212ENST00000513042 R3HCC1Q9Y3T6 440 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-212ENST00000513042 RALYLQ86SE5 291 aaKnown RBP20.94■□□□□ 0.94
ARHGEF28-212ENST00000513042 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
ARHGEF28-212ENST00000513042 CT47A1Q5JQC4 288 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF28-212ENST00000513042 CDC45O75419 566 aa20.93■□□□□ 0.94
ARHGEF28-212ENST00000513042 NFKBIBQ15653 356 aa20.93■□□□□ 0.94
ARHGEF28-212ENST00000513042 AK7Q96M32 723 aa20.93■□□□□ 0.94
ARHGEF28-212ENST00000513042 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
ARHGEF28-212ENST00000513042 SKIDA1Q1XH10 827 aa20.92■□□□□ 0.94
ARHGEF28-212ENST00000513042 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF28-212ENST00000513042 FAM177BA6PVY3 158 aa20.92■□□□□ 0.94
ARHGEF28-212ENST00000513042 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
ARHGEF28-212ENST00000513042 DNAJC2Q99543 621 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-212ENST00000513042 EPS15P42566 896 aa20.91■□□□□ 0.94
ARHGEF28-212ENST00000513042 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 NINLQ9Y2I6 1382 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 HSP90AB4PQ58FF6 505 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 CAGE1Q8TC20 777 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 FSD1Q9BTV5 496 aa20.9■□□□□ 0.94
ARHGEF28-212ENST00000513042 NASPP49321 788 aaPredicted RBP20.89■□□□□ 0.93
ARHGEF28-212ENST00000513042 ZFYVE27Q5T4F4 411 aa20.89■□□□□ 0.93
ARHGEF28-212ENST00000513042 ODF2Q5BJF6 829 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 ARGLU1Q9NWB6 273 aaPredicted RBP20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 CCDC39Q9UFE4 941 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 HSP90AB2PQ58FF8 381 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 RRP12Q5JTH9 1297 aaKnown RBP20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 CCDC7Q96M83 1385 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 BRMS1Q9HCU9 246 aa20.88■□□□□ 0.93
ARHGEF28-212ENST00000513042 CAVIN1Q6NZI2 390 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-212ENST00000513042 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
ARHGEF28-212ENST00000513042 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
ARHGEF28-212ENST00000513042 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
ARHGEF28-212ENST00000513042 ATP2B1P20020 1258 aa20.87■□□□□ 0.93
ARHGEF28-212ENST00000513042 SMC2O95347 1197 aa20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 PTPRGP23470 1445 aa20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 NAT10Q9H0A0 1025 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 CEBPZQ03701 1054 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 SDF4Q9BRK5 362 aa20.86■□□□□ 0.93
ARHGEF28-212ENST00000513042 KRI1Q8N9T8 703 aaKnown RBP20.85■□□□□ 0.93
ARHGEF28-212ENST00000513042 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
ARHGEF28-212ENST00000513042 IKQ13123 557 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF28-212ENST00000513042 STK11IPQ8N1F8 1099 aa20.84■□□□□ 0.93
ARHGEF28-212ENST00000513042 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
ARHGEF28-212ENST00000513042 PSMA5P28066 241 aa20.84■□□□□ 0.93
ARHGEF28-212ENST00000513042 ZNF644Q9H582 1327 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF28-212ENST00000513042 CNTLNQ9NXG0 1405 aa20.84■□□□□ 0.93
ARHGEF28-212ENST00000513042 BRPF1P55201 1214 aaPredicted RBP20.83■□□□□ 0.92
ARHGEF28-212ENST00000513042 PRPF40AO75400 957 aaKnown RBP20.83■□□□□ 0.92
ARHGEF28-212ENST00000513042 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.92
ARHGEF28-212ENST00000513042 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
ARHGEF28-212ENST00000513042 OFD1O75665 1012 aa20.82■□□□□ 0.92
ARHGEF28-212ENST00000513042 TRIM5Q9C035 493 aa20.82■□□□□ 0.92
ARHGEF28-212ENST00000513042 ACBD3Q9H3P7 528 aa20.82■□□□□ 0.92
ARHGEF28-212ENST00000513042 HSP90B2PQ58FF3 399 aa20.82■□□□□ 0.92
ARHGEF28-212ENST00000513042 SURF6O75683 361 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-212ENST00000513042 MAP4K4O95819 1239 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF28-212ENST00000513042 TRAK2O60296 914 aa20.81■□□□□ 0.92
ARHGEF28-212ENST00000513042 CDR1P51861 262 aa20.81■□□□□ 0.92
ARHGEF28-212ENST00000513042 SPC24Q8NBT2 197 aa20.8■□□□□ 0.92
ARHGEF28-212ENST00000513042 TSPY26PQ9H489 355 aa20.8■□□□□ 0.92
ARHGEF28-212ENST00000513042 XBP1P17861 261 aa20.8■□□□□ 0.92
ARHGEF28-212ENST00000513042 MRE11P49959 708 aa20.79■□□□□ 0.92
ARHGEF28-212ENST00000513042 MTHFSP49914 203 aa20.79■□□□□ 0.92
ARHGEF28-212ENST00000513042 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
ARHGEF28-212ENST00000513042 ATF3P18847 181 aa20.79■□□□□ 0.92
ARHGEF28-212ENST00000513042 NEK4P51957 841 aa20.79■□□□□ 0.92
ARHGEF28-212ENST00000513042 STK3Q13188 491 aa20.78■□□□□ 0.92
ARHGEF28-212ENST00000513042 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
ARHGEF28-212ENST00000513042 NOB1Q9ULX3 412 aaKnown RBP20.77■□□□□ 0.92
ARHGEF28-212ENST00000513042 NLRP6P59044 892 aa20.77■□□□□ 0.92
ARHGEF28-212ENST00000513042 EXOSC9Q06265 439 aaKnown RBP20.77■□□□□ 0.92
ARHGEF28-212ENST00000513042 NOM1Q5C9Z4 860 aaKnown RBP20.77■□□□□ 0.92
ARHGEF28-212ENST00000513042 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.91
ARHGEF28-212ENST00000513042 RBM42Q9BTD8 480 aaKnown RBP20.76■□□□□ 0.91
ARHGEF28-212ENST00000513042 FIBPO43427 364 aa20.76■□□□□ 0.91
ARHGEF28-212ENST00000513042 TMEM132AQ24JP5 1023 aa20.76■□□□□ 0.91
ARHGEF28-212ENST00000513042 TTC39AQ5SRH9 613 aa20.76■□□□□ 0.91
ARHGEF28-212ENST00000513042 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
ARHGEF28-212ENST00000513042 RBM10P98175 930 aaKnown RBP20.75■□□□□ 0.91
ARHGEF28-212ENST00000513042 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
ARHGEF28-212ENST00000513042 MPNDQ8N594 471 aa20.75■□□□□ 0.91
ARHGEF28-212ENST00000513042 CDK5RAP3Q96JB5 506 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms