RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
RACK1-229ENST00000513027 CPS1P31327 1500 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
RACK1-229ENST00000513027 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
RACK1-229ENST00000513027 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
RACK1-229ENST00000513027 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
RACK1-229ENST00000513027 NSD2O96028 1365 aa16.77■□□□□ 0.28
RACK1-229ENST00000513027 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
RACK1-229ENST00000513027 METP08581 1390 aa16.77■□□□□ 0.27
RACK1-229ENST00000513027 BCANQ96GW7 911 aa16.76■□□□□ 0.27
RACK1-229ENST00000513027 LTKP29376 864 aa16.75■□□□□ 0.27
RACK1-229ENST00000513027 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
RACK1-229ENST00000513027 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
RACK1-229ENST00000513027 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
RACK1-229ENST00000513027 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
RACK1-229ENST00000513027 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
RACK1-229ENST00000513027 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
RACK1-229ENST00000513027 ANKLE2Q86XL3 938 aa16.72■□□□□ 0.27
RACK1-229ENST00000513027 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
RACK1-229ENST00000513027 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
RACK1-229ENST00000513027 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.27
RACK1-229ENST00000513027 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
RACK1-229ENST00000513027 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
RACK1-229ENST00000513027 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
RACK1-229ENST00000513027 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
RACK1-229ENST00000513027 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
RACK1-229ENST00000513027 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
RACK1-229ENST00000513027 ATP7BP35670 1465 aa16.69■□□□□ 0.26
RACK1-229ENST00000513027 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
RACK1-229ENST00000513027 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
RACK1-229ENST00000513027 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
RACK1-229ENST00000513027 SAFB2Q14151 953 aaKnown RBP eCLIP16.68■□□□□ 0.26
RACK1-229ENST00000513027 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
RACK1-229ENST00000513027 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
RACK1-229ENST00000513027 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
RACK1-229ENST00000513027 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
RACK1-229ENST00000513027 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
RACK1-229ENST00000513027 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
RACK1-229ENST00000513027 XRN1Q8IZH2 1706 aaKnown RBP16.63■□□□□ 0.25
RACK1-229ENST00000513027 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
RACK1-229ENST00000513027 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
RACK1-229ENST00000513027 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
RACK1-229ENST00000513027 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
RACK1-229ENST00000513027 AMOTL2Q9Y2J4 779 aa16.63■□□□□ 0.25
RACK1-229ENST00000513027 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
RACK1-229ENST00000513027 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
RACK1-229ENST00000513027 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
RACK1-229ENST00000513027 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
RACK1-229ENST00000513027 PTPRUQ92729 1446 aa16.61■□□□□ 0.25
RACK1-229ENST00000513027 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
RACK1-229ENST00000513027 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
RACK1-229ENST00000513027 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
RACK1-229ENST00000513027 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
RACK1-229ENST00000513027 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
RACK1-229ENST00000513027 CABP1Q9NZU7 370 aa16.59■□□□□ 0.25
RACK1-229ENST00000513027 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
RACK1-229ENST00000513027 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
RACK1-229ENST00000513027 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
RACK1-229ENST00000513027 PDE3BQ13370 1112 aa16.58■□□□□ 0.24
RACK1-229ENST00000513027 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
RACK1-229ENST00000513027 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
RACK1-229ENST00000513027 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
RACK1-229ENST00000513027 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
RACK1-229ENST00000513027 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
RACK1-229ENST00000513027 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
RACK1-229ENST00000513027 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
RACK1-229ENST00000513027 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
RACK1-229ENST00000513027 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
RACK1-229ENST00000513027 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
RACK1-229ENST00000513027 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
RACK1-229ENST00000513027 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
RACK1-229ENST00000513027 FYB1O15117 783 aa16.53■□□□□ 0.24
RACK1-229ENST00000513027 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.24
RACK1-229ENST00000513027 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
RACK1-229ENST00000513027 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
RACK1-229ENST00000513027 KCNA6P17658 529 aa16.51■□□□□ 0.23
RACK1-229ENST00000513027 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
RACK1-229ENST00000513027 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
RACK1-229ENST00000513027 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
RACK1-229ENST00000513027 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
RACK1-229ENST00000513027 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
RACK1-229ENST00000513027 NEFLP07196 543 aa16.48■□□□□ 0.23
RACK1-229ENST00000513027 MTHFSP49914 203 aa16.48■□□□□ 0.23
RACK1-229ENST00000513027 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
RACK1-229ENST00000513027 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
RACK1-229ENST00000513027 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
RACK1-229ENST00000513027 NCOA3Q9Y6Q9 1424 aa16.47■□□□□ 0.23
RACK1-229ENST00000513027 NKTRP30414 1462 aaKnown RBP16.47■□□□□ 0.23
RACK1-229ENST00000513027 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
RACK1-229ENST00000513027 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
RACK1-229ENST00000513027 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 FMN2Q9NZ56 1722 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 USP6P35125 1406 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 ACEP12821 1306 aa16.45■□□□□ 0.22
RACK1-229ENST00000513027 COG3Q96JB2 828 aa16.44■□□□□ 0.22
RACK1-229ENST00000513027 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
RACK1-229ENST00000513027 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms