RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 NOS1P29475 1434 aa14.45□□□□□ -0.1
TRIO-220ENST00000512979 SYNMO15061 1565 aa14.44□□□□□ -0.1
TRIO-220ENST00000512979 PPP1R37O75864 691 aa14.44□□□□□ -0.1
TRIO-220ENST00000512979 LRRC7Q96NW7 1537 aa14.43□□□□□ -0.1
TRIO-220ENST00000512979 HSPA1LP34931 641 aa14.43□□□□□ -0.1
TRIO-220ENST00000512979 PPARGC1BQ86YN6 1023 aaKnown RBP14.43□□□□□ -0.1
TRIO-220ENST00000512979 STRCP1A6NGW2 1772 aa14.42□□□□□ -0.1
TRIO-220ENST00000512979 TMEM132AQ24JP5 1023 aa14.42□□□□□ -0.1
TRIO-220ENST00000512979 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
TRIO-220ENST00000512979 SLC52A1Q9NWF4 448 aa14.42□□□□□ -0.1
TRIO-220ENST00000512979 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
TRIO-220ENST00000512979 ITGAEP38570 1179 aa14.41□□□□□ -0.1
TRIO-220ENST00000512979 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
TRIO-220ENST00000512979 EFCAB3Q8N7B9 438 aa14.41□□□□□ -0.1
TRIO-220ENST00000512979 RPRD2Q5VT52 1461 aaKnown RBP14.41□□□□□ -0.1
TRIO-220ENST00000512979 ADGRB3O60242 1522 aa14.41□□□□□ -0.1
TRIO-220ENST00000512979 KDM5AP29375 1690 aaKnown RBP14.39□□□□□ -0.11
TRIO-220ENST00000512979 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
TRIO-220ENST00000512979 TET3O43151 1660 aa14.39□□□□□ -0.11
TRIO-220ENST00000512979 ALKQ9UM73 1620 aa14.38□□□□□ -0.11
TRIO-220ENST00000512979 NLRP6P59044 892 aa14.38□□□□□ -0.11
TRIO-220ENST00000512979 CABP2Q9NPB3 220 aa14.38□□□□□ -0.11
TRIO-220ENST00000512979 UNC13BO14795 1591 aa14.38□□□□□ -0.11
TRIO-220ENST00000512979 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
TRIO-220ENST00000512979 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
TRIO-220ENST00000512979 SLC26A8Q96RN1 970 aa14.37□□□□□ -0.11
TRIO-220ENST00000512979 MAP3K13O43283 966 aa14.36□□□□□ -0.11
TRIO-220ENST00000512979 PHF8Q9UPP1 1060 aa14.36□□□□□ -0.11
TRIO-220ENST00000512979 SOX12O15370 315 aa14.35□□□□□ -0.11
TRIO-220ENST00000512979 KCNA6P17658 529 aa14.35□□□□□ -0.11
TRIO-220ENST00000512979 E2F4Q16254 413 aa14.35□□□□□ -0.11
TRIO-220ENST00000512979 NUP155O75694 1391 aa14.34□□□□□ -0.11
TRIO-220ENST00000512979 GCC2Q8IWJ2 1684 aa14.34□□□□□ -0.11
TRIO-220ENST00000512979 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
TRIO-220ENST00000512979 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.11
TRIO-220ENST00000512979 KIF12Q96FN5 646 aa14.33□□□□□ -0.12
TRIO-220ENST00000512979 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
TRIO-220ENST00000512979 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
TRIO-220ENST00000512979 SOCS7O14512 581 aa14.32□□□□□ -0.12
TRIO-220ENST00000512979 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRIO-220ENST00000512979 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
TRIO-220ENST00000512979 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
TRIO-220ENST00000512979 E9PCH4 1651 aa14.31□□□□□ -0.12
TRIO-220ENST00000512979 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
TRIO-220ENST00000512979 PLEKHG1Q9ULL1 1385 aa14.31□□□□□ -0.12
TRIO-220ENST00000512979 TMEM131LA2VDJ0 1609 aa14.3□□□□□ -0.12
TRIO-220ENST00000512979 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
TRIO-220ENST00000512979 MED1Q15648 1581 aaPredicted RBP14.3□□□□□ -0.12
TRIO-220ENST00000512979 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
TRIO-220ENST00000512979 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRIO-220ENST00000512979 XIRP1Q702N8 1843 aaKnown RBP14.29□□□□□ -0.12
TRIO-220ENST00000512979 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
TRIO-220ENST00000512979 NKTRP30414 1462 aaKnown RBP14.28□□□□□ -0.12
TRIO-220ENST00000512979 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
TRIO-220ENST00000512979 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
TRIO-220ENST00000512979 SEMA3EO15041 775 aa14.27□□□□□ -0.13
TRIO-220ENST00000512979 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
TRIO-220ENST00000512979 FAM135BQ49AJ0 1406 aa14.25□□□□□ -0.13
TRIO-220ENST00000512979 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
TRIO-220ENST00000512979 MSH6P52701 1360 aa14.24□□□□□ -0.13
TRIO-220ENST00000512979 TESPA1A2RU30 521 aaPredicted RBP14.24□□□□□ -0.13
TRIO-220ENST00000512979 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
TRIO-220ENST00000512979 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
TRIO-220ENST00000512979 BRPF1P55201 1214 aaPredicted RBP14.22□□□□□ -0.13
TRIO-220ENST00000512979 NAIPQ13075 1403 aa14.22□□□□□ -0.13
TRIO-220ENST00000512979 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.13
TRIO-220ENST00000512979 DIP2AQ14689 1571 aa14.21□□□□□ -0.14
TRIO-220ENST00000512979 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
TRIO-220ENST00000512979 ZNF326Q5BKZ1 582 aaKnown RBP14.2□□□□□ -0.14
TRIO-220ENST00000512979 PIK3R4Q99570 1358 aa14.2□□□□□ -0.14
TRIO-220ENST00000512979 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
TRIO-220ENST00000512979 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
TRIO-220ENST00000512979 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
TRIO-220ENST00000512979 ROBO1Q9Y6N7 1651 aa14.18□□□□□ -0.14
TRIO-220ENST00000512979 PDE4AP27815 886 aa14.18□□□□□ -0.14
TRIO-220ENST00000512979 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
TRIO-220ENST00000512979 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
TRIO-220ENST00000512979 HFM1A2PYH4 1435 aa14.17□□□□□ -0.14
TRIO-220ENST00000512979 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
TRIO-220ENST00000512979 TRPM2O94759 1503 aa14.17□□□□□ -0.14
TRIO-220ENST00000512979 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
TRIO-220ENST00000512979 SLC24A3Q9HC58 644 aa14.16□□□□□ -0.14
TRIO-220ENST00000512979 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
TRIO-220ENST00000512979 MFSD10Q14728 455 aa14.15□□□□□ -0.14
TRIO-220ENST00000512979 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
TRIO-220ENST00000512979 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
TRIO-220ENST00000512979 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
TRIO-220ENST00000512979 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
TRIO-220ENST00000512979 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 NRXN3Q9Y4C0 1643 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 ATF3P18847 181 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
TRIO-220ENST00000512979 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
TRIO-220ENST00000512979 METP08581 1390 aa14.11□□□□□ -0.15
TRIO-220ENST00000512979 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
TRIO-220ENST00000512979 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
TRIO-220ENST00000512979 RGS17Q9UGC6 210 aaPredicted RBP14.11□□□□□ -0.15
TRIO-220ENST00000512979 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms