RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
HTT-210ENST00000512909 BCAMP50895 628 aa8.06□□□□□ -1.12
HTT-210ENST00000512909 PCDHB3Q9Y5E6 796 aa8.06□□□□□ -1.12
HTT-210ENST00000512909 NISCHQ9Y2I1 1504 aa8.05□□□□□ -1.12
HTT-210ENST00000512909 SUPT5HO00267 1087 aaKnown RBP8.05□□□□□ -1.12
HTT-210ENST00000512909 NR1I2O75469 434 aa8.05□□□□□ -1.12
HTT-210ENST00000512909 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
HTT-210ENST00000512909 KCTD12Q96CX2 325 aaKnown RBP8.05□□□□□ -1.12
HTT-210ENST00000512909 PCDHB15Q9Y5E8 787 aa8.05□□□□□ -1.12
HTT-210ENST00000512909 LILRB3O75022 631 aa8.04□□□□□ -1.12
HTT-210ENST00000512909 HRCP23327 699 aa8.04□□□□□ -1.12
HTT-210ENST00000512909 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
HTT-210ENST00000512909 PPP2R2DQ66LE6 453 aa8.04□□□□□ -1.12
HTT-210ENST00000512909 MCM6Q14566 821 aa8.03□□□□□ -1.12
HTT-210ENST00000512909 QPCTQ16769 361 aa8.03□□□□□ -1.12
HTT-210ENST00000512909 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
HTT-210ENST00000512909 MYT1LQ9UL68 1186 aa8.03□□□□□ -1.12
HTT-210ENST00000512909 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
HTT-210ENST00000512909 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
HTT-210ENST00000512909 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
HTT-210ENST00000512909 HLA-CQ95604 372 aa8.01□□□□□ -1.13
HTT-210ENST00000512909 PTPN5P54829 565 aa8□□□□□ -1.13
HTT-210ENST00000512909 NYAP1Q6ZVC0 841 aa8□□□□□ -1.13
HTT-210ENST00000512909 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
HTT-210ENST00000512909 MORN1Q5T089 497 aa7.99□□□□□ -1.13
HTT-210ENST00000512909 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
HTT-210ENST00000512909 RETREG3Q86VR2 466 aa7.99□□□□□ -1.13
HTT-210ENST00000512909 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
HTT-210ENST00000512909 WBP1LQ9NX94 342 aa7.98□□□□□ -1.13
HTT-210ENST00000512909 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
HTT-210ENST00000512909 SLC27A5Q9Y2P5 690 aa7.98□□□□□ -1.13
HTT-210ENST00000512909 A6NJR5 290 aa7.97□□□□□ -1.13
HTT-210ENST00000512909 APLP1P51693 650 aa7.97□□□□□ -1.13
HTT-210ENST00000512909 COPS2P61201 443 aa7.97□□□□□ -1.13
HTT-210ENST00000512909 SYMPKQ92797 1274 aaKnown RBP7.97□□□□□ -1.13
HTT-210ENST00000512909 CLUAP1Q96AJ1 413 aa7.97□□□□□ -1.13
HTT-210ENST00000512909 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
HTT-210ENST00000512909 ABL2P42684 1182 aa7.96□□□□□ -1.14
HTT-210ENST00000512909 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.14
HTT-210ENST00000512909 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
HTT-210ENST00000512909 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
HTT-210ENST00000512909 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
HTT-210ENST00000512909 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
HTT-210ENST00000512909 CTDSPL2Q05D32 466 aa7.94□□□□□ -1.14
HTT-210ENST00000512909 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
HTT-210ENST00000512909 SPSB2Q99619 263 aa7.93□□□□□ -1.14
HTT-210ENST00000512909 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
HTT-210ENST00000512909 SALL2Q9Y467 1007 aaPredicted RBP7.93□□□□□ -1.14
HTT-210ENST00000512909 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
HTT-210ENST00000512909 TRAK2O60296 914 aa7.92□□□□□ -1.14
HTT-210ENST00000512909 CTHP32929 405 aa7.92□□□□□ -1.14
HTT-210ENST00000512909 ARID3AQ99856 593 aa7.92□□□□□ -1.14
HTT-210ENST00000512909 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
HTT-210ENST00000512909 SOCS7O14512 581 aa7.91□□□□□ -1.14
HTT-210ENST00000512909 DESI1Q6ICB0 168 aa7.91□□□□□ -1.14
HTT-210ENST00000512909 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
HTT-210ENST00000512909 RNF19BQ6ZMZ0 732 aa7.91□□□□□ -1.14
HTT-210ENST00000512909 MTMR14Q8NCE2 650 aa7.91□□□□□ -1.14
HTT-210ENST00000512909 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
HTT-210ENST00000512909 JUNDP17535 347 aa7.9□□□□□ -1.14
HTT-210ENST00000512909 POM121Q96HA1 1249 aa7.9□□□□□ -1.14
HTT-210ENST00000512909 IL21Q9HBE4 155 aa7.9□□□□□ -1.14
HTT-210ENST00000512909 WASHC4Q2M389 1173 aa7.89□□□□□ -1.15
HTT-210ENST00000512909 FBXO31Q5XUX0 539 aaPredicted RBP7.89□□□□□ -1.15
HTT-210ENST00000512909 LRRN4Q8WUT4 740 aa7.89□□□□□ -1.15
HTT-210ENST00000512909 ZNF777Q9ULD5 760 aaPredicted RBP7.89□□□□□ -1.15
HTT-210ENST00000512909 ARID3CA6NKF2 412 aa7.88□□□□□ -1.15
HTT-210ENST00000512909 CCDC24Q8N4L8 307 aa7.88□□□□□ -1.15
HTT-210ENST00000512909 MTRQ99707 1265 aa7.88□□□□□ -1.15
HTT-210ENST00000512909 HCSTQ9UBK5 93 aa7.88□□□□□ -1.15
HTT-210ENST00000512909 TBC1D2BQ9UPU7 963 aa7.88□□□□□ -1.15
HTT-210ENST00000512909 ZPR1O75312 459 aa7.87□□□□□ -1.15
HTT-210ENST00000512909 ADH1BP00325 375 aa7.87□□□□□ -1.15
HTT-210ENST00000512909 LYPD8Q6UX82 237 aa7.87□□□□□ -1.15
HTT-210ENST00000512909 NR6A1Q15406 480 aa7.86□□□□□ -1.15
HTT-210ENST00000512909 PTPRNQ16849 979 aa7.86□□□□□ -1.15
HTT-210ENST00000512909 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
HTT-210ENST00000512909 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
HTT-210ENST00000512909 SLC6A16Q9GZN6 736 aa7.86□□□□□ -1.15
HTT-210ENST00000512909 GGCXP38435 758 aa7.85□□□□□ -1.15
HTT-210ENST00000512909 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
HTT-210ENST00000512909 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
HTT-210ENST00000512909 HOMEZQ8IX15 550 aa7.84□□□□□ -1.15
HTT-210ENST00000512909 CALR3Q96L12 384 aaKnown RBP7.84□□□□□ -1.15
HTT-210ENST00000512909 ARXQ96QS3 562 aa7.84□□□□□ -1.15
HTT-210ENST00000512909 HMX1Q9NP08 348 aaPredicted RBP7.84□□□□□ -1.15
HTT-210ENST00000512909 SERPINA10Q9UK55 444 aa7.84□□□□□ -1.15
HTT-210ENST00000512909 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
HTT-210ENST00000512909 TLL1O43897 1013 aa7.83□□□□□ -1.16
HTT-210ENST00000512909 ZNF592Q92610 1267 aa7.83□□□□□ -1.16
HTT-210ENST00000512909 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
HTT-210ENST00000512909 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
HTT-210ENST00000512909 KCNC4Q03721 635 aa7.82□□□□□ -1.16
HTT-210ENST00000512909 SEMA3FQ13275 785 aa7.82□□□□□ -1.16
HTT-210ENST00000512909 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
HTT-210ENST00000512909 NBPF14Q5TI25 921 aa7.81□□□□□ -1.16
HTT-210ENST00000512909 GJD4Q96KN9 370 aaPredicted RBP7.81□□□□□ -1.16
HTT-210ENST00000512909 DXOO77932 396 aaKnown RBP7.8□□□□□ -1.16
HTT-210ENST00000512909 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
HTT-210ENST00000512909 AGERQ15109 404 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms