RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 PTGDRQ13258 359 aa11.29□□□□□ -0.6
RFC1-215ENST00000512881 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
RFC1-215ENST00000512881 NUP153P49790 1475 aaKnown RBP11.29□□□□□ -0.6
RFC1-215ENST00000512881 NUDT18Q6ZVK8 323 aa11.28□□□□□ -0.6
RFC1-215ENST00000512881 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
RFC1-215ENST00000512881 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
RFC1-215ENST00000512881 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
RFC1-215ENST00000512881 KIF21BO75037 1637 aa11.27□□□□□ -0.61
RFC1-215ENST00000512881 RAPGEF6Q8TEU7 1601 aa11.27□□□□□ -0.61
RFC1-215ENST00000512881 PHLDB1Q86UU1 1377 aa11.27□□□□□ -0.61
RFC1-215ENST00000512881 RAPGEF3O95398 923 aa11.26□□□□□ -0.61
RFC1-215ENST00000512881 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
RFC1-215ENST00000512881 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
RFC1-215ENST00000512881 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
RFC1-215ENST00000512881 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
RFC1-215ENST00000512881 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
RFC1-215ENST00000512881 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
RFC1-215ENST00000512881 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
RFC1-215ENST00000512881 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
RFC1-215ENST00000512881 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
RFC1-215ENST00000512881 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
RFC1-215ENST00000512881 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
RFC1-215ENST00000512881 ABCA9Q8IUA7 1624 aa11.21□□□□□ -0.61
RFC1-215ENST00000512881 NEO1Q92859 1461 aa11.21□□□□□ -0.61
RFC1-215ENST00000512881 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
RFC1-215ENST00000512881 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
RFC1-215ENST00000512881 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
RFC1-215ENST00000512881 EYA1Q99502 592 aa11.2□□□□□ -0.62
RFC1-215ENST00000512881 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
RFC1-215ENST00000512881 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
RFC1-215ENST00000512881 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
RFC1-215ENST00000512881 FCHSD2O94868 740 aa11.18□□□□□ -0.62
RFC1-215ENST00000512881 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
RFC1-215ENST00000512881 GPR37O15354 613 aa11.17□□□□□ -0.62
RFC1-215ENST00000512881 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
RFC1-215ENST00000512881 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
RFC1-215ENST00000512881 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
RFC1-215ENST00000512881 ARID4BQ4LE39 1312 aaPredicted RBP11.15□□□□□ -0.62
RFC1-215ENST00000512881 FANCAO15360 1455 aa11.15□□□□□ -0.62
RFC1-215ENST00000512881 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.62
RFC1-215ENST00000512881 A0A0G2JS52 829 aa11.15□□□□□ -0.62
RFC1-215ENST00000512881 PPP4CP60510 307 aa11.15□□□□□ -0.62
RFC1-215ENST00000512881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
RFC1-215ENST00000512881 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
RFC1-215ENST00000512881 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
RFC1-215ENST00000512881 PLCH2O75038 1416 aa11.14□□□□□ -0.63
RFC1-215ENST00000512881 RNF40O75150 1001 aa11.13□□□□□ -0.63
RFC1-215ENST00000512881 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
RFC1-215ENST00000512881 HIC1Q14526 733 aa11.12□□□□□ -0.63
RFC1-215ENST00000512881 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
RFC1-215ENST00000512881 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
RFC1-215ENST00000512881 TROQ12816 1431 aaPredicted RBP11.1□□□□□ -0.63
RFC1-215ENST00000512881 DNAJB2P25686 324 aa11.1□□□□□ -0.63
RFC1-215ENST00000512881 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
RFC1-215ENST00000512881 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
RFC1-215ENST00000512881 APLP1P51693 650 aa11.09□□□□□ -0.63
RFC1-215ENST00000512881 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
RFC1-215ENST00000512881 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
RFC1-215ENST00000512881 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
RFC1-215ENST00000512881 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
RFC1-215ENST00000512881 FRMPD1Q5SYB0 1578 aa11.08□□□□□ -0.64
RFC1-215ENST00000512881 FECHP22830 423 aa11.08□□□□□ -0.64
RFC1-215ENST00000512881 KCNC4Q03721 635 aa11.08□□□□□ -0.64
RFC1-215ENST00000512881 CLIP1P30622 1438 aa11.08□□□□□ -0.64
RFC1-215ENST00000512881 RCCD1A6NED2 376 aa11.07□□□□□ -0.64
RFC1-215ENST00000512881 GNPATO15228 680 aa11.07□□□□□ -0.64
RFC1-215ENST00000512881 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
RFC1-215ENST00000512881 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
RFC1-215ENST00000512881 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
RFC1-215ENST00000512881 PTPRMP28827 1452 aa11.06□□□□□ -0.64
RFC1-215ENST00000512881 MAGI2Q86UL8 1455 aa11.06□□□□□ -0.64
RFC1-215ENST00000512881 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
RFC1-215ENST00000512881 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
RFC1-215ENST00000512881 MLECQ14165 292 aa11.05□□□□□ -0.64
RFC1-215ENST00000512881 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
RFC1-215ENST00000512881 MTRQ99707 1265 aa11.05□□□□□ -0.64
RFC1-215ENST00000512881 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
RFC1-215ENST00000512881 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
RFC1-215ENST00000512881 METTL3Q86U44 580 aaKnown RBP11.04□□□□□ -0.64
RFC1-215ENST00000512881 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
RFC1-215ENST00000512881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
RFC1-215ENST00000512881 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
RFC1-215ENST00000512881 ADAMTSL3P82987 1691 aa11.03□□□□□ -0.64
RFC1-215ENST00000512881 ZMYM4Q5VZL5 1548 aa11.03□□□□□ -0.64
RFC1-215ENST00000512881 ZFYVE16Q7Z3T8 1539 aa11.03□□□□□ -0.64
RFC1-215ENST00000512881 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
RFC1-215ENST00000512881 KIF14Q15058 1648 aa11.02□□□□□ -0.64
RFC1-215ENST00000512881 ATP10AO60312 1499 aa11.02□□□□□ -0.65
RFC1-215ENST00000512881 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
RFC1-215ENST00000512881 ARHGAP5Q13017 1502 aa11.02□□□□□ -0.65
RFC1-215ENST00000512881 RGS20O76081 388 aa11.01□□□□□ -0.65
RFC1-215ENST00000512881 OATP04181 439 aa11.01□□□□□ -0.65
RFC1-215ENST00000512881 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
RFC1-215ENST00000512881 IL21Q9HBE4 155 aa11.01□□□□□ -0.65
RFC1-215ENST00000512881 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
RFC1-215ENST00000512881 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
RFC1-215ENST00000512881 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
RFC1-215ENST00000512881 PCF11O94913 1555 aaKnown RBP10.99□□□□□ -0.65
RFC1-215ENST00000512881 BCORL1Q5H9F3 1711 aa10.99□□□□□ -0.65
RFC1-215ENST00000512881 C9orf84Q5VXU9 1444 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms