RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRR20BP86481 221 aa6.06□□□□□ -1.44
PDGFC-208ENST00000512711 PRR20AP86496 221 aa6.06□□□□□ -1.44
PDGFC-208ENST00000512711 HOXA2O43364 376 aa6.05□□□□□ -1.44
PDGFC-208ENST00000512711 GDF9O60383 454 aa6.05□□□□□ -1.44
PDGFC-208ENST00000512711 AMHR2Q16671 573 aa6.05□□□□□ -1.44
PDGFC-208ENST00000512711 PCDHGC3Q9UN70 934 aa6.05□□□□□ -1.44
PDGFC-208ENST00000512711 FCF1Q9Y324 198 aaKnown RBP6.05□□□□□ -1.44
PDGFC-208ENST00000512711 NDUFV2P19404 249 aa6.04□□□□□ -1.44
PDGFC-208ENST00000512711 TTLL12Q14166 644 aaPredicted RBP6.04□□□□□ -1.44
PDGFC-208ENST00000512711 GRIPAP1Q4V328 841 aa6.04□□□□□ -1.44
PDGFC-208ENST00000512711 ZNF697Q5TEC3 545 aa6.04□□□□□ -1.44
PDGFC-208ENST00000512711 GIGYF2Q6Y7W6 1299 aaKnown RBP6.04□□□□□ -1.44
PDGFC-208ENST00000512711 SPIRE2Q8WWL2 714 aa6.04□□□□□ -1.44
PDGFC-208ENST00000512711 SLC24A3Q9HC58 644 aa6.04□□□□□ -1.44
PDGFC-208ENST00000512711 FAM187AA6NFU0 413 aa6.03□□□□□ -1.44
PDGFC-208ENST00000512711 TNFRSF10AO00220 468 aa6.03□□□□□ -1.44
PDGFC-208ENST00000512711 MS4A1P11836 297 aa6.03□□□□□ -1.44
PDGFC-208ENST00000512711 PARP9Q8IXQ6 854 aa6.03□□□□□ -1.44
PDGFC-208ENST00000512711 AK7Q96M32 723 aa6.03□□□□□ -1.44
PDGFC-208ENST00000512711 USB1Q9BQ65 265 aaKnown RBP6.03□□□□□ -1.44
PDGFC-208ENST00000512711 MOXD2PA6NHM9 499 aa6.02□□□□□ -1.45
PDGFC-208ENST00000512711 USP46P62068 366 aa6.02□□□□□ -1.45
PDGFC-208ENST00000512711 Q3C1V9 767 aa6.02□□□□□ -1.45
PDGFC-208ENST00000512711 NUTM1Q86Y26 1132 aa6.02□□□□□ -1.45
PDGFC-208ENST00000512711 PKD2L1Q9P0L9 805 aa6.02□□□□□ -1.45
PDGFC-208ENST00000512711 MMP16P51512 607 aa6.01□□□□□ -1.45
PDGFC-208ENST00000512711 FOXC1Q12948 553 aa6.01□□□□□ -1.45
PDGFC-208ENST00000512711 MSS51Q4VC12 460 aa6.01□□□□□ -1.45
PDGFC-208ENST00000512711 BEGAINQ9BUH8 593 aa6.01□□□□□ -1.45
PDGFC-208ENST00000512711 ST8SIA5O15466 376 aa6□□□□□ -1.45
PDGFC-208ENST00000512711 FDX1P10109 184 aa6□□□□□ -1.45
PDGFC-208ENST00000512711 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
PDGFC-208ENST00000512711 AAASQ9NRG9 546 aa6□□□□□ -1.45
PDGFC-208ENST00000512711 SLC24A1O60721 1099 aa5.99□□□□□ -1.45
PDGFC-208ENST00000512711 DXOO77932 396 aaKnown RBP5.99□□□□□ -1.45
PDGFC-208ENST00000512711 PDE4DQ08499 809 aa5.99□□□□□ -1.45
PDGFC-208ENST00000512711 TREML4Q6UXN2 200 aa5.99□□□□□ -1.45
PDGFC-208ENST00000512711 TBC1D2Q9BYX2 928 aa5.99□□□□□ -1.45
PDGFC-208ENST00000512711 PCDHB15Q9Y5E8 787 aa5.99□□□□□ -1.45
PDGFC-208ENST00000512711 CD2BP2O95400 341 aaKnown RBP5.98□□□□□ -1.45
PDGFC-208ENST00000512711 RPIAP49247 311 aa5.98□□□□□ -1.45
PDGFC-208ENST00000512711 PTCRAQ6ISU1 281 aaPredicted RBP5.98□□□□□ -1.45
PDGFC-208ENST00000512711 CCDC24Q8N4L8 307 aa5.98□□□□□ -1.45
PDGFC-208ENST00000512711 C6orf229H3BNL8 230 aa5.97□□□□□ -1.45
PDGFC-208ENST00000512711 DACH1Q9UI36 760 aa5.97□□□□□ -1.45
PDGFC-208ENST00000512711 ZBTB24O43167 697 aaPredicted RBP5.95□□□□□ -1.46
PDGFC-208ENST00000512711 RETREG3Q86VR2 466 aa5.95□□□□□ -1.46
PDGFC-208ENST00000512711 JUNDP17535 347 aa5.94□□□□□ -1.46
PDGFC-208ENST00000512711 SKOR1P84550 965 aa5.94□□□□□ -1.46
PDGFC-208ENST00000512711 TRIM32Q13049 653 aa5.94□□□□□ -1.46
PDGFC-208ENST00000512711 RSBN1LQ6PCB5 846 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-208ENST00000512711 TOR4AQ9NXH8 423 aa5.94□□□□□ -1.46
PDGFC-208ENST00000512711 SPTLC1O15269 473 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 RIC3Q7Z5B4 369 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 PRR7Q8TB68 274 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 CABLES1Q8TDN4 633 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 BCANQ96GW7 911 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 LIMD1Q9UGP4 676 aa5.93□□□□□ -1.46
PDGFC-208ENST00000512711 CFAP99D6REC4 459 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 AVPP01185 164 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 HRCP23327 699 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 CSPP1Q1MSJ5 1256 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 CRIPAKQ8N1N5 446 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 MRGPRX2Q96LB1 330 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 NUDT12Q9BQG2 462 aa5.92□□□□□ -1.46
PDGFC-208ENST00000512711 GMPR2Q9P2T1 348 aaKnown RBP5.92□□□□□ -1.46
PDGFC-208ENST00000512711 MTMR2Q13614 643 aa5.91□□□□□ -1.46
PDGFC-208ENST00000512711 QPCTQ16769 361 aa5.91□□□□□ -1.46
PDGFC-208ENST00000512711 RC3H1Q5TC82 1133 aaKnown RBP5.91□□□□□ -1.46
PDGFC-208ENST00000512711 MYSM1Q5VVJ2 828 aa5.91□□□□□ -1.46
PDGFC-208ENST00000512711 GPBP1L1Q9HC44 474 aaPredicted RBP5.91□□□□□ -1.46
PDGFC-208ENST00000512711 C11orf95C9JLR9 678 aaPredicted RBP5.9□□□□□ -1.46
PDGFC-208ENST00000512711 J3QL48 77 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 WNT7AO00755 349 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 AXIN1O15169 862 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 WFS1O76024 890 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 CYP4X1Q8N118 509 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 EVA1BQ9NVM1 165 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 POLR3EQ9NVU0 708 aa5.9□□□□□ -1.46
PDGFC-208ENST00000512711 PER1O15534 1290 aaPredicted RBP5.89□□□□□ -1.47
PDGFC-208ENST00000512711 SMPD1P17405 629 aa5.89□□□□□ -1.47
PDGFC-208ENST00000512711 GJA5P36382 358 aa5.89□□□□□ -1.47
PDGFC-208ENST00000512711 RTL5Q5HYW3 569 aaPredicted RBP5.89□□□□□ -1.47
PDGFC-208ENST00000512711 FBXO31Q5XUX0 539 aaPredicted RBP5.89□□□□□ -1.47
PDGFC-208ENST00000512711 TTC24A2A3L6 582 aaPredicted RBP5.88□□□□□ -1.47
PDGFC-208ENST00000512711 CCNYL3P0C7X3 344 aa5.88□□□□□ -1.47
PDGFC-208ENST00000512711 SH3BP2P78314 561 aa5.88□□□□□ -1.47
PDGFC-208ENST00000512711 NFX1Q12986 1120 aaKnown RBP5.88□□□□□ -1.47
PDGFC-208ENST00000512711 SNIP1Q8TAD8 396 aaKnown RBP5.88□□□□□ -1.47
PDGFC-208ENST00000512711 BAP1Q92560 729 aa5.88□□□□□ -1.47
PDGFC-208ENST00000512711 FAM117AQ9C073 453 aa5.88□□□□□ -1.47
PDGFC-208ENST00000512711 SPDYE5A6NIY4 337 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 SIAH2O43255 324 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 SMCPP49901 116 aaPredicted RBP5.87□□□□□ -1.47
PDGFC-208ENST00000512711 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 DIXDC1Q155Q3 683 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 PTPRNQ16849 979 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 CTC1Q2NKJ3 1217 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 LINC01559Q495D7 138 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 LYPD8Q6UX82 237 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms