RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
SNF8-211ENST00000512243 FRMPD1Q5SYB0 1578 aa14.41□□□□□ -0.1
SNF8-211ENST00000512243 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
SNF8-211ENST00000512243 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
SNF8-211ENST00000512243 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
SNF8-211ENST00000512243 POGZQ7Z3K3 1410 aa14.4□□□□□ -0.1
SNF8-211ENST00000512243 ZNF518AQ6AHZ1 1483 aa14.39□□□□□ -0.11
SNF8-211ENST00000512243 HRO43593 1189 aa14.39□□□□□ -0.11
SNF8-211ENST00000512243 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
SNF8-211ENST00000512243 VPS9D1Q9Y2B5 631 aa14.39□□□□□ -0.11
SNF8-211ENST00000512243 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
SNF8-211ENST00000512243 DNMT1P26358 1616 aaKnown RBP14.38□□□□□ -0.11
SNF8-211ENST00000512243 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
SNF8-211ENST00000512243 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
SNF8-211ENST00000512243 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
SNF8-211ENST00000512243 KDM5CP41229 1560 aa14.38□□□□□ -0.11
SNF8-211ENST00000512243 ZNF644Q9H582 1327 aaPredicted RBP14.38□□□□□ -0.11
SNF8-211ENST00000512243 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
SNF8-211ENST00000512243 ZMYM4Q5VZL5 1548 aa14.37□□□□□ -0.11
SNF8-211ENST00000512243 EPAS1Q99814 870 aa14.37□□□□□ -0.11
SNF8-211ENST00000512243 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
SNF8-211ENST00000512243 HECW2Q9P2P5 1572 aa14.37□□□□□ -0.11
SNF8-211ENST00000512243 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
SNF8-211ENST00000512243 FAM50AQ14320 339 aaKnown RBP14.36□□□□□ -0.11
SNF8-211ENST00000512243 NBR1Q14596 966 aa14.36□□□□□ -0.11
SNF8-211ENST00000512243 ZBED2Q9BTP6 218 aa14.36□□□□□ -0.11
SNF8-211ENST00000512243 MBD5Q9P267 1494 aa14.36□□□□□ -0.11
SNF8-211ENST00000512243 COL17A1Q9UMD9 1497 aaPredicted RBP14.36□□□□□ -0.11
SNF8-211ENST00000512243 COL9A1P20849 921 aa14.35□□□□□ -0.11
SNF8-211ENST00000512243 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
SNF8-211ENST00000512243 HNRNPMP52272 730 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNF8-211ENST00000512243 INO80Q9ULG1 1556 aaPredicted RBP14.34□□□□□ -0.11
SNF8-211ENST00000512243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■□□□□ 10.3
SNF8-211ENST00000512243 PPP1R3GB7ZBB8 358 aa14.33□□□□□ -0.12
SNF8-211ENST00000512243 KCNV2Q8TDN2 545 aa14.33□□□□□ -0.12
SNF8-211ENST00000512243 DAPK1P53355 1430 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 ZFYVE16Q7Z3T8 1539 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 MAST1Q9Y2H9 1570 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 GRXCR2A6NFK2 248 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 SLC4A5Q9BY07 1137 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
SNF8-211ENST00000512243 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
SNF8-211ENST00000512243 C6orf132Q5T0Z8 1188 aa14.31□□□□□ -0.12
SNF8-211ENST00000512243 RSPH4AQ5TD94 716 aa14.31□□□□□ -0.12
SNF8-211ENST00000512243 PROX2Q3B8N5 592 aa14.3□□□□□ -0.12
SNF8-211ENST00000512243 ABCC5O15440 1437 aa14.3□□□□□ -0.12
SNF8-211ENST00000512243 C9orf84Q5VXU9 1444 aa14.3□□□□□ -0.12
SNF8-211ENST00000512243 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
SNF8-211ENST00000512243 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
SNF8-211ENST00000512243 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
SNF8-211ENST00000512243 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
SNF8-211ENST00000512243 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
SNF8-211ENST00000512243 MLH3Q9UHC1 1453 aa14.29□□□□□ -0.12
SNF8-211ENST00000512243 MAP3K7O43318 606 aa14.28□□□□□ -0.12
SNF8-211ENST00000512243 PLXNC1O60486 1568 aa14.28□□□□□ -0.12
SNF8-211ENST00000512243 EN1Q05925 392 aaPredicted RBP14.28□□□□□ -0.12
SNF8-211ENST00000512243 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
SNF8-211ENST00000512243 RTEL1-TNFRSF6BF6WH68 1400 aa14.27□□□□□ -0.12
SNF8-211ENST00000512243 TSPY4P0CV99 314 aa14.27□□□□□ -0.13
SNF8-211ENST00000512243 TSPY10P0CW01 314 aa14.27□□□□□ -0.13
SNF8-211ENST00000512243 TSR1Q2NL82 804 aaKnown RBP14.27□□□□□ -0.13
SNF8-211ENST00000512243 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
SNF8-211ENST00000512243 KCTD12Q96CX2 325 aaKnown RBP14.26□□□□□ -0.13
SNF8-211ENST00000512243 ADGRL2O95490 1459 aa14.25□□□□□ -0.13
SNF8-211ENST00000512243 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
SNF8-211ENST00000512243 BHMG1C9JSJ3 638 aaPredicted RBP14.24□□□□□ -0.13
SNF8-211ENST00000512243 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
SNF8-211ENST00000512243 ITGAEP38570 1179 aa14.23□□□□□ -0.13
SNF8-211ENST00000512243 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
SNF8-211ENST00000512243 GCC2Q8IWJ2 1684 aa14.22□□□□□ -0.13
SNF8-211ENST00000512243 PTPRKQ15262 1439 aa14.22□□□□□ -0.13
SNF8-211ENST00000512243 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
SNF8-211ENST00000512243 ATP10AO60312 1499 aa14.21□□□□□ -0.13
SNF8-211ENST00000512243 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
SNF8-211ENST00000512243 CHIC2Q9UKJ5 165 aa14.21□□□□□ -0.13
SNF8-211ENST00000512243 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
SNF8-211ENST00000512243 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
SNF8-211ENST00000512243 KIF15Q9NS87 1388 aa14.2□□□□□ -0.14
SNF8-211ENST00000512243 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
SNF8-211ENST00000512243 A2MP01023 1474 aa14.19□□□□□ -0.14
SNF8-211ENST00000512243 OSBPP22059 807 aa14.19□□□□□ -0.14
SNF8-211ENST00000512243 RABGEF1Q9UJ41 708 aa14.19□□□□□ -0.14
SNF8-211ENST00000512243 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
SNF8-211ENST00000512243 NCOA1Q15788 1441 aa14.18□□□□□ -0.14
SNF8-211ENST00000512243 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
SNF8-211ENST00000512243 GOLGA8CPA6NN73 597 aa14.17□□□□□ -0.14
SNF8-211ENST00000512243 MLLT3P42568 568 aaPredicted RBP14.17□□□□□ -0.14
SNF8-211ENST00000512243 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
SNF8-211ENST00000512243 KIAA1468Q9P260 1216 aa14.17□□□□□ -0.14
SNF8-211ENST00000512243 BCORL1Q5H9F3 1711 aa14.16□□□□□ -0.14
SNF8-211ENST00000512243 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
SNF8-211ENST00000512243 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
SNF8-211ENST00000512243 AGLP35573 1532 aa14.15□□□□□ -0.14
SNF8-211ENST00000512243 TRIM6-TRIM34B2RNG4 842 aa14.15□□□□□ -0.14
SNF8-211ENST00000512243 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
SNF8-211ENST00000512243 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1837.7 ms