RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PKD1L3Q7Z443 1732 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 CCDC144AA2RUR9 1427 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 C10orf71Q711Q0 1435 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 SIPA1L3O60292 1781 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 DLG5Q8TDM6 1919 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 CLTCL1P53675 1640 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 ARFGEF1Q9Y6D6 1849 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 PAPPA2Q9BXP8 1791 aa2.94□□□□□ -1.94
TRAPPC13-211ENST00000512009 KRTAP17-1Q9BYP8 105 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 KCPQ6ZWJ8 1503 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 COL6A3P12111 3177 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 ATP7BP35670 1465 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 NHSQ6T4R5 1651 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 UHRF1BP1Q6BDS2 1440 aa2.93□□□□□ -1.94
TRAPPC13-211ENST00000512009 ONECUT3O60422 494 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-211ENST00000512009 COL5A3P25940 1745 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-211ENST00000512009 RALGAPBQ86X10 1494 aa2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 PPP1R15AO75807 674 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 COL3A1P02461 1466 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 ZFHX4Q86UP3 3567 aa2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 LRRC37A3O60309 1634 aa2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 KANK4Q5T7N3 995 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 PRUNE2Q8WUY3 3088 aa2.91□□□□□ -1.94
TRAPPC13-211ENST00000512009 UBR2Q8IWV8 1755 aa2.9□□□□□ -1.94
TRAPPC13-211ENST00000512009 NEUROD1Q13562 356 aa2.9□□□□□ -1.94
TRAPPC13-211ENST00000512009 ATRNO75882 1429 aa2.9□□□□□ -1.95
TRAPPC13-211ENST00000512009 COL14A1Q05707 1796 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-211ENST00000512009 C5P01031 1676 aa2.9□□□□□ -1.95
TRAPPC13-211ENST00000512009 LRPPRCP42704 1394 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-211ENST00000512009 DICER1Q9UPY3 1922 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-211ENST00000512009 LAMB4A4D0S4 1761 aa2.89□□□□□ -1.95
TRAPPC13-211ENST00000512009 MSH5O43196 834 aa2.89□□□□□ -1.95
TRAPPC13-211ENST00000512009 SIRT1Q96EB6 747 aa2.89□□□□□ -1.95
TRAPPC13-211ENST00000512009 PSME4Q14997 1843 aa2.88□□□□□ -1.95
TRAPPC13-211ENST00000512009 ARHGAP5Q13017 1502 aa2.88□□□□□ -1.95
TRAPPC13-211ENST00000512009 PLEKHG1Q9ULL1 1385 aa2.88□□□□□ -1.95
TRAPPC13-211ENST00000512009 SBNO2Q9Y2G9 1366 aa2.88□□□□□ -1.95
TRAPPC13-211ENST00000512009 MEGF6O75095 1541 aa2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 PKD2Q13563 968 aa2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 C11orf95C9JLR9 678 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 MTUS2Q5JR59 1369 aa2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 A0A1B0GUL6 1792 aa2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 KCNH8Q96L42 1107 aa2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 BRD4O60885 1362 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-211ENST00000512009 CD163L1Q9NR16 1453 aa2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 GPRASP1Q5JY77 1395 aa2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 LTBP1Q14766 1721 aa2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 A0A0C4DFX4 3053 aa2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 CPSF1Q10570 1443 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 TRIOO75962 3097 aa2.86□□□□□ -1.95
TRAPPC13-211ENST00000512009 NFAT5O94916 1531 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 KDM3BQ7LBC6 1761 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 ITGB4P16144 1822 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 RSPH4AQ5TD94 716 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 RELNP78509 3460 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 RGS17Q9UGC6 210 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 SCAPERQ9BY12 1400 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 FRYLO94915 3013 aa2.85□□□□□ -1.95
TRAPPC13-211ENST00000512009 ABCC5O15440 1437 aa2.84□□□□□ -1.95
TRAPPC13-211ENST00000512009 ANKRD30BQ9BXX2 1392 aa2.84□□□□□ -1.95
TRAPPC13-211ENST00000512009 ADGRL3Q9HAR2 1447 aa2.84□□□□□ -1.95
TRAPPC13-211ENST00000512009 WDFY4Q6ZS81 3184 aa2.84□□□□□ -1.95
TRAPPC13-211ENST00000512009 AEBP2Q6ZN18 517 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-211ENST00000512009 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.96
TRAPPC13-211ENST00000512009 UBR3Q6ZT12 1888 aa2.84□□□□□ -1.96
TRAPPC13-211ENST00000512009 MYH15Q9Y2K3 1946 aa2.84□□□□□ -1.96
TRAPPC13-211ENST00000512009 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-211ENST00000512009 ANKARQ7Z5J8 1434 aa2.83□□□□□ -1.96
TRAPPC13-211ENST00000512009 ADCY9O60503 1353 aa2.83□□□□□ -1.96
TRAPPC13-211ENST00000512009 SBF1O95248 1867 aa2.83□□□□□ -1.96
TRAPPC13-211ENST00000512009 ASPMQ8IZT6 3477 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 INSRP06213 1382 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 ZNF521Q96K83 1311 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 LAMA1P25391 3075 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 LOC400499M0QZD8 3231 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 SNED1Q8TER0 1413 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 C5orf42Q9H799 3197 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 NPHP4O75161 1426 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 PIK3C2GO75747 1445 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 CFAP47Q6ZTR5 3102 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 LRRC37AA6NMS7 1700 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 TRIM26Q12899 539 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 PARD3Q8TEW0 1356 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 TMEM2Q9UHN6 1383 aa2.82□□□□□ -1.96
TRAPPC13-211ENST00000512009 ZMYM3Q14202 1370 aa2.81□□□□□ -1.96
TRAPPC13-211ENST00000512009 CCDC184Q52MB2 194 aa2.81□□□□□ -1.96
TRAPPC13-211ENST00000512009 CLSPNQ9HAW4 1339 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 SLC34A2O95436 690 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 ECM29Q5VYK3 1845 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 KDM6AO15550 1401 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 ZNF609O15014 1411 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 PXDNLA1KZ92 1463 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 NSD2O96028 1365 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 CYB5RLQ6IPT4 315 aa2.8□□□□□ -1.96
TRAPPC13-211ENST00000512009 BLMP54132 1417 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 BCORQ6W2J9 1755 aa2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 CHMP7Q8WUX9 453 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 RAB3GAP2Q9H2M9 1393 aa2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 DAPK1P53355 1430 aa2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 USP19O94966 1318 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms