RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GABBR2O75899 941 aa8.73□□□□□ -1.01
RNF4-217ENST00000511892 AMOTL2Q9Y2J4 779 aa8.73□□□□□ -1.01
RNF4-217ENST00000511892 METP08581 1390 aa8.73□□□□□ -1.01
RNF4-217ENST00000511892 MSH6P52701 1360 aa8.73□□□□□ -1.01
RNF4-217ENST00000511892 NCOA3Q9Y6Q9 1424 aa8.72□□□□□ -1.01
RNF4-217ENST00000511892 MPHOSPH9Q99550 1183 aa8.72□□□□□ -1.01
RNF4-217ENST00000511892 NALCNQ8IZF0 1738 aa8.71□□□□□ -1.01
RNF4-217ENST00000511892 SLAIN2Q9P270 581 aa8.71□□□□□ -1.02
RNF4-217ENST00000511892 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.02
RNF4-217ENST00000511892 SPATA31E1Q6ZUB1 1445 aa8.7□□□□□ -1.02
RNF4-217ENST00000511892 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
RNF4-217ENST00000511892 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
RNF4-217ENST00000511892 RPGRIP1LQ68CZ1 1315 aa8.69□□□□□ -1.02
RNF4-217ENST00000511892 VGFO15240 615 aaPredicted RBP8.68□□□□□ -1.02
RNF4-217ENST00000511892 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
RNF4-217ENST00000511892 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
RNF4-217ENST00000511892 CCDC144AA2RUR9 1427 aa8.68□□□□□ -1.02
RNF4-217ENST00000511892 AHDC1Q5TGY3 1603 aaPredicted RBP8.68□□□□□ -1.02
RNF4-217ENST00000511892 DCCP43146 1447 aa8.67□□□□□ -1.02
RNF4-217ENST00000511892 NHSL1Q5SYE7 1610 aa8.67□□□□□ -1.02
RNF4-217ENST00000511892 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
RNF4-217ENST00000511892 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 MST1RQ04912 1400 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 ADGRF5Q8IZF2 1346 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 SOCS7O14512 581 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 ATF3P18847 181 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 KNDC1Q76NI1 1749 aa8.66□□□□□ -1.02
RNF4-217ENST00000511892 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 PRAG1Q86YV5 1406 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 ADGRL3Q9HAR2 1447 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 ROBO2Q9HCK4 1378 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
RNF4-217ENST00000511892 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
RNF4-217ENST00000511892 RGS17Q9UGC6 210 aaPredicted RBP8.65□□□□□ -1.02
RNF4-217ENST00000511892 BRINP3Q76B58 766 aa8.64□□□□□ -1.03
RNF4-217ENST00000511892 LAMC1P11047 1609 aa8.64□□□□□ -1.03
RNF4-217ENST00000511892 PIK3C2GO75747 1445 aa8.63□□□□□ -1.03
RNF4-217ENST00000511892 RGPD8O14715 1765 aaPredicted RBP8.63□□□□□ -1.03
RNF4-217ENST00000511892 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
RNF4-217ENST00000511892 JCADQ9P266 1359 aa8.63□□□□□ -1.03
RNF4-217ENST00000511892 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
RNF4-217ENST00000511892 NRXN1Q9ULB1 1477 aa8.62□□□□□ -1.03
RNF4-217ENST00000511892 TECPR2O15040 1411 aa8.62□□□□□ -1.03
RNF4-217ENST00000511892 LRP6O75581 1613 aa8.62□□□□□ -1.03
RNF4-217ENST00000511892 HRCP23327 699 aa8.61□□□□□ -1.03
RNF4-217ENST00000511892 LHX8Q68G74 356 aa8.61□□□□□ -1.03
RNF4-217ENST00000511892 FARP1Q9Y4F1 1045 aaPredicted RBP8.61□□□□□ -1.03
RNF4-217ENST00000511892 MYOM2P54296 1465 aa8.61□□□□□ -1.03
RNF4-217ENST00000511892 C1orf167Q5SNV9 1468 aa8.61□□□□□ -1.03
RNF4-217ENST00000511892 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
RNF4-217ENST00000511892 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
RNF4-217ENST00000511892 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
RNF4-217ENST00000511892 TMEM132EQ6IEE7 984 aa8.6□□□□□ -1.03
RNF4-217ENST00000511892 DDX17Q92841 729 aaKnown RBP8.6□□□□□ -1.03
RNF4-217ENST00000511892 ABCC11Q96J66 1382 aa8.6□□□□□ -1.03
RNF4-217ENST00000511892 WAPLQ7Z5K2 1190 aa8.59□□□□□ -1.03
RNF4-217ENST00000511892 C14orf93Q9H972 538 aaKnown RBP8.59□□□□□ -1.03
RNF4-217ENST00000511892 STK26Q9P289 416 aa8.59□□□□□ -1.03
RNF4-217ENST00000511892 YTHDC2Q9H6S0 1430 aaKnown RBP8.59□□□□□ -1.03
RNF4-217ENST00000511892 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
RNF4-217ENST00000511892 CFAP70Q5T0N1 1121 aa8.58□□□□□ -1.04
RNF4-217ENST00000511892 POTEAQ6S8J7 498 aa8.58□□□□□ -1.04
RNF4-217ENST00000511892 ORAI2Q96SN7 254 aa8.58□□□□□ -1.04
RNF4-217ENST00000511892 SPATA31A6Q5VVP1 1343 aa8.57□□□□□ -1.04
RNF4-217ENST00000511892 ADGRB1O14514 1584 aa8.56□□□□□ -1.04
RNF4-217ENST00000511892 COL22A1Q8NFW1 1626 aaPredicted RBP8.56□□□□□ -1.04
RNF4-217ENST00000511892 MARF1Q9Y4F3 1742 aaKnown RBP8.56□□□□□ -1.04
RNF4-217ENST00000511892 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
RNF4-217ENST00000511892 DLC1Q96QB1 1528 aa8.55□□□□□ -1.04
RNF4-217ENST00000511892 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
RNF4-217ENST00000511892 SIRT1Q96EB6 747 aa8.55□□□□□ -1.04
RNF4-217ENST00000511892 DHX57Q6P158 1386 aaKnown RBP8.55□□□□□ -1.04
RNF4-217ENST00000511892 PNPLA6Q8IY17 1366 aa8.55□□□□□ -1.04
RNF4-217ENST00000511892 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 ARHGEF28Q8N1W1 1705 aaKnown RBP8.54□□□□□ -1.04
RNF4-217ENST00000511892 KIF1AQ12756 1690 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 PXDNQ92626 1479 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
RNF4-217ENST00000511892 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
RNF4-217ENST00000511892 POTEIP0CG38 1075 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
RNF4-217ENST00000511892 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
RNF4-217ENST00000511892 ADGRB2O60241 1585 aa8.53□□□□□ -1.04
RNF4-217ENST00000511892 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
RNF4-217ENST00000511892 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
RNF4-217ENST00000511892 MEX3CQ5U5Q3 659 aaKnown RBP8.53□□□□□ -1.04
RNF4-217ENST00000511892 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
RNF4-217ENST00000511892 PRAM1Q96QH2 718 aa8.52□□□□□ -1.05
RNF4-217ENST00000511892 FOXO3O43524 673 aa8.51□□□□□ -1.05
RNF4-217ENST00000511892 SAFB2Q14151 953 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNF4-217ENST00000511892 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
RNF4-217ENST00000511892 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
RNF4-217ENST00000511892 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
RNF4-217ENST00000511892 ABCA3Q99758 1704 aa8.5□□□□□ -1.05
RNF4-217ENST00000511892 ZRANB1Q9UGI0 708 aa8.5□□□□□ -1.05
RNF4-217ENST00000511892 TRAK1Q9UPV9 953 aa8.5□□□□□ -1.05
RNF4-217ENST00000511892 AFF2P51816 1311 aa8.5□□□□□ -1.05
RNF4-217ENST00000511892 NPHP3Q7Z494 1330 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms