RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 CGNL1Q0VF96 1302 aa22.02■■□□□ 1.12
CXCL3-204ENST00000511669 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
CXCL3-204ENST00000511669 C3P01024 1663 aa22.02■■□□□ 1.12
CXCL3-204ENST00000511669 SRPK2P78362 688 aaKnown RBP22.02■■□□□ 1.11
CXCL3-204ENST00000511669 ABCC11Q96J66 1382 aa22.02■■□□□ 1.11
CXCL3-204ENST00000511669 BLMP54132 1417 aaPredicted RBP22.01■■□□□ 1.11
CXCL3-204ENST00000511669 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
CXCL3-204ENST00000511669 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
CXCL3-204ENST00000511669 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
CXCL3-204ENST00000511669 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
CXCL3-204ENST00000511669 NUDCQ9Y266 331 aa22■■□□□ 1.11
CXCL3-204ENST00000511669 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
CXCL3-204ENST00000511669 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
CXCL3-204ENST00000511669 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
CXCL3-204ENST00000511669 TERF2IPQ9NYB0 399 aa21.98■■□□□ 1.11
CXCL3-204ENST00000511669 SIRT1Q96EB6 747 aa21.98■■□□□ 1.11
CXCL3-204ENST00000511669 BCANQ96GW7 911 aa21.98■■□□□ 1.11
CXCL3-204ENST00000511669 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
CXCL3-204ENST00000511669 EID1Q9Y6B2 187 aa21.97■■□□□ 1.11
CXCL3-204ENST00000511669 MINK1Q8N4C8 1332 aaPredicted RBP21.96■■□□□ 1.11
CXCL3-204ENST00000511669 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
CXCL3-204ENST00000511669 FAM135BQ49AJ0 1406 aa21.95■■□□□ 1.1
CXCL3-204ENST00000511669 PLEKHG1Q9ULL1 1385 aa21.94■■□□□ 1.1
CXCL3-204ENST00000511669 HDGFL2Q7Z4V5 671 aaPredicted RBP21.94■■□□□ 1.1
CXCL3-204ENST00000511669 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
CXCL3-204ENST00000511669 TECPR2O15040 1411 aa21.93■■□□□ 1.1
CXCL3-204ENST00000511669 CPS1P31327 1500 aa21.92■■□□□ 1.1
CXCL3-204ENST00000511669 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
CXCL3-204ENST00000511669 SLIT1O75093 1534 aa21.91■■□□□ 1.1
CXCL3-204ENST00000511669 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
CXCL3-204ENST00000511669 THEMISQ8N1K5 641 aaPredicted RBP21.9■■□□□ 1.1
CXCL3-204ENST00000511669 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
CXCL3-204ENST00000511669 NGEFQ8N5V2 710 aa21.89■■□□□ 1.09
CXCL3-204ENST00000511669 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
CXCL3-204ENST00000511669 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
CXCL3-204ENST00000511669 METP08581 1390 aa21.88■■□□□ 1.09
CXCL3-204ENST00000511669 ATP7BP35670 1465 aa21.87■■□□□ 1.09
CXCL3-204ENST00000511669 ARHGAP23Q9P227 1491 aa21.87■■□□□ 1.09
CXCL3-204ENST00000511669 ANKRD26Q9UPS8 1709 aa21.87■■□□□ 1.09
CXCL3-204ENST00000511669 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
CXCL3-204ENST00000511669 CEBPAP49715 358 aaPredicted RBP21.87■■□□□ 1.09
CXCL3-204ENST00000511669 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
CXCL3-204ENST00000511669 MED14O60244 1454 aa21.86■■□□□ 1.09
CXCL3-204ENST00000511669 ADAMTS13Q76LX8 1427 aa21.83■■□□□ 1.09
CXCL3-204ENST00000511669 WAPLQ7Z5K2 1190 aa21.83■■□□□ 1.08
CXCL3-204ENST00000511669 WASLO00401 505 aaPredicted RBP21.82■■□□□ 1.08
CXCL3-204ENST00000511669 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
CXCL3-204ENST00000511669 KIF20BQ96Q89 1820 aa21.82■■□□□ 1.08
CXCL3-204ENST00000511669 PLEKHH1Q9ULM0 1364 aa21.8■■□□□ 1.08
CXCL3-204ENST00000511669 ADGRB2O60241 1585 aa21.79■■□□□ 1.08
CXCL3-204ENST00000511669 TBX22Q9Y458 520 aa21.79■■□□□ 1.08
CXCL3-204ENST00000511669 CEP170BQ9Y4F5 1589 aaPredicted RBP21.79■■□□□ 1.08
CXCL3-204ENST00000511669 CD163L1Q9NR16 1453 aa21.78■■□□□ 1.08
CXCL3-204ENST00000511669 LTKP29376 864 aa21.78■■□□□ 1.08
CXCL3-204ENST00000511669 CABP1Q9NZU7 370 aa21.78■■□□□ 1.08
CXCL3-204ENST00000511669 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
CXCL3-204ENST00000511669 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.08
CXCL3-204ENST00000511669 RNF123Q5XPI4 1314 aa21.77■■□□□ 1.08
CXCL3-204ENST00000511669 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.07
CXCL3-204ENST00000511669 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
CXCL3-204ENST00000511669 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
CXCL3-204ENST00000511669 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
CXCL3-204ENST00000511669 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
CXCL3-204ENST00000511669 MTHFSP49914 203 aa21.74■■□□□ 1.07
CXCL3-204ENST00000511669 ITSN1Q15811 1721 aa21.74■■□□□ 1.07
CXCL3-204ENST00000511669 EDC4Q6P2E9 1401 aaKnown RBP21.74■■□□□ 1.07
CXCL3-204ENST00000511669 CCDC61Q9Y6R9 512 aa21.74■■□□□ 1.07
CXCL3-204ENST00000511669 SHPRHQ149N8 1683 aa21.74■■□□□ 1.07
CXCL3-204ENST00000511669 PTCH1Q13635 1447 aa21.73■■□□□ 1.07
CXCL3-204ENST00000511669 CDC42BPGQ6DT37 1551 aa21.73■■□□□ 1.07
CXCL3-204ENST00000511669 RCAN3Q9UKA8 241 aa21.73■■□□□ 1.07
CXCL3-204ENST00000511669 PIK3R4Q99570 1358 aa21.72■■□□□ 1.07
CXCL3-204ENST00000511669 GOLGA2Q08379 1002 aa21.72■■□□□ 1.07
CXCL3-204ENST00000511669 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
CXCL3-204ENST00000511669 ZNF692Q9BU19 519 aaPredicted RBP21.72■■□□□ 1.07
CXCL3-204ENST00000511669 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
CXCL3-204ENST00000511669 SENP3-EIF4A1A0A087X0R7 540 aa21.71■■□□□ 1.07
CXCL3-204ENST00000511669 FYB1O15117 783 aa21.71■■□□□ 1.07
CXCL3-204ENST00000511669 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
CXCL3-204ENST00000511669 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
CXCL3-204ENST00000511669 CPSF1Q10570 1443 aaKnown RBP21.7■■□□□ 1.06
CXCL3-204ENST00000511669 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
CXCL3-204ENST00000511669 SETD1BQ9UPS6 1966 aaKnown RBP21.69■■□□□ 1.06
CXCL3-204ENST00000511669 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
CXCL3-204ENST00000511669 AKAP12Q02952 1782 aa21.69■■□□□ 1.06
CXCL3-204ENST00000511669 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
CXCL3-204ENST00000511669 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
CXCL3-204ENST00000511669 PNNQ9H307 717 aaKnown RBP21.68■■□□□ 1.06
CXCL3-204ENST00000511669 CCDC146Q8IYE0 955 aa21.67■■□□□ 1.06
CXCL3-204ENST00000511669 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
CXCL3-204ENST00000511669 ZNF521Q96K83 1311 aa21.67■■□□□ 1.06
CXCL3-204ENST00000511669 APAF1O14727 1248 aa21.66■■□□□ 1.06
CXCL3-204ENST00000511669 ANKLE2Q86XL3 938 aa21.66■■□□□ 1.06
CXCL3-204ENST00000511669 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.65■■□□□ 1.06
CXCL3-204ENST00000511669 TOPAZ1Q8N9V7 1692 aa21.64■■□□□ 1.06
CXCL3-204ENST00000511669 PTPRUQ92729 1446 aa21.64■■□□□ 1.06
CXCL3-204ENST00000511669 XRN1Q8IZH2 1706 aaKnown RBP21.64■■□□□ 1.06
CXCL3-204ENST00000511669 RRP1P56182 461 aaKnown RBP21.64■■□□□ 1.05
CXCL3-204ENST00000511669 CDCA7LQ96GN5 454 aa21.64■■□□□ 1.05
CXCL3-204ENST00000511669 E9PSI1 815 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms