RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 NUP155O75694 1391 aa13.06□□□□□ -0.32
PDPN-209ENST00000510906 SLC52A1Q9NWF4 448 aa13.05□□□□□ -0.32
PDPN-209ENST00000510906 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
PDPN-209ENST00000510906 TET3O43151 1660 aa13.05□□□□□ -0.32
PDPN-209ENST00000510906 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
PDPN-209ENST00000510906 CPS1P31327 1500 aa13.04□□□□□ -0.32
PDPN-209ENST00000510906 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
PDPN-209ENST00000510906 MAP3K13O43283 966 aa13.04□□□□□ -0.32
PDPN-209ENST00000510906 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
PDPN-209ENST00000510906 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
PDPN-209ENST00000510906 ADGRB3O60242 1522 aa13.03□□□□□ -0.32
PDPN-209ENST00000510906 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.33
PDPN-209ENST00000510906 GCC2Q8IWJ2 1684 aa13□□□□□ -0.33
PDPN-209ENST00000510906 NAIPQ13075 1403 aa13□□□□□ -0.33
PDPN-209ENST00000510906 E9PCH4 1651 aa12.99□□□□□ -0.33
PDPN-209ENST00000510906 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
PDPN-209ENST00000510906 NBR1Q14596 966 aa12.99□□□□□ -0.33
PDPN-209ENST00000510906 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
PDPN-209ENST00000510906 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
PDPN-209ENST00000510906 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
PDPN-209ENST00000510906 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
PDPN-209ENST00000510906 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
PDPN-209ENST00000510906 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
PDPN-209ENST00000510906 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.33
PDPN-209ENST00000510906 TOM1O60784 492 aa12.96□□□□□ -0.33
PDPN-209ENST00000510906 HFM1A2PYH4 1435 aa12.96□□□□□ -0.34
PDPN-209ENST00000510906 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
PDPN-209ENST00000510906 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
PDPN-209ENST00000510906 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
PDPN-209ENST00000510906 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
PDPN-209ENST00000510906 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
PDPN-209ENST00000510906 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
PDPN-209ENST00000510906 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
PDPN-209ENST00000510906 PLEKHG1Q9ULL1 1385 aa12.94□□□□□ -0.34
PDPN-209ENST00000510906 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
PDPN-209ENST00000510906 KCNA6P17658 529 aa12.93□□□□□ -0.34
PDPN-209ENST00000510906 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
PDPN-209ENST00000510906 SOX12O15370 315 aa12.92□□□□□ -0.34
PDPN-209ENST00000510906 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
PDPN-209ENST00000510906 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
PDPN-209ENST00000510906 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDPN-209ENST00000510906 MYO5BQ9ULV0 1848 aa12.91□□□□□ -0.34
PDPN-209ENST00000510906 HSPA1LP34931 641 aa12.91□□□□□ -0.34
PDPN-209ENST00000510906 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
PDPN-209ENST00000510906 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
PDPN-209ENST00000510906 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
PDPN-209ENST00000510906 TMEM94Q12767 1356 aa12.9□□□□□ -0.34
PDPN-209ENST00000510906 NLRP6P59044 892 aa12.89□□□□□ -0.35
PDPN-209ENST00000510906 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
PDPN-209ENST00000510906 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
PDPN-209ENST00000510906 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
PDPN-209ENST00000510906 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
PDPN-209ENST00000510906 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
PDPN-209ENST00000510906 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
PDPN-209ENST00000510906 TRPM2O94759 1503 aa12.87□□□□□ -0.35
PDPN-209ENST00000510906 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
PDPN-209ENST00000510906 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
PDPN-209ENST00000510906 PPP1R37O75864 691 aa12.86□□□□□ -0.35
PDPN-209ENST00000510906 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
PDPN-209ENST00000510906 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
PDPN-209ENST00000510906 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
PDPN-209ENST00000510906 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
PDPN-209ENST00000510906 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
PDPN-209ENST00000510906 DIP2AQ14689 1571 aa12.82□□□□□ -0.36
PDPN-209ENST00000510906 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
PDPN-209ENST00000510906 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
PDPN-209ENST00000510906 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
PDPN-209ENST00000510906 NEXMIFQ5QGS0 1516 aa12.81□□□□□ -0.36
PDPN-209ENST00000510906 MSH6P52701 1360 aa12.81□□□□□ -0.36
PDPN-209ENST00000510906 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
PDPN-209ENST00000510906 CHD2O14647 1828 aaKnown RBP12.8□□□□□ -0.36
PDPN-209ENST00000510906 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
PDPN-209ENST00000510906 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
PDPN-209ENST00000510906 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 METP08581 1390 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
PDPN-209ENST00000510906 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
PDPN-209ENST00000510906 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.37
PDPN-209ENST00000510906 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
PDPN-209ENST00000510906 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.37
PDPN-209ENST00000510906 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
PDPN-209ENST00000510906 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
PDPN-209ENST00000510906 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
PDPN-209ENST00000510906 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
PDPN-209ENST00000510906 KIF1BO60333 1816 aa12.75□□□□□ -0.37
PDPN-209ENST00000510906 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
PDPN-209ENST00000510906 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
PDPN-209ENST00000510906 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
PDPN-209ENST00000510906 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
PDPN-209ENST00000510906 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
PDPN-209ENST00000510906 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
PDPN-209ENST00000510906 ATF3P18847 181 aa12.72□□□□□ -0.37
PDPN-209ENST00000510906 TIE1P35590 1138 aa12.72□□□□□ -0.37
PDPN-209ENST00000510906 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
PDPN-209ENST00000510906 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
PDPN-209ENST00000510906 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
PDPN-209ENST00000510906 DCCP43146 1447 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms