RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.46
NFKB1-209ENST00000510638 KIAA1210Q9ULL0 1709 aa12.15□□□□□ -0.46
NFKB1-209ENST00000510638 YTHDC2Q9H6S0 1430 aaKnown RBP12.15□□□□□ -0.46
NFKB1-209ENST00000510638 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
NFKB1-209ENST00000510638 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.46
NFKB1-209ENST00000510638 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
NFKB1-209ENST00000510638 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
NFKB1-209ENST00000510638 POGKQ9P215 609 aa12.14□□□□□ -0.47
NFKB1-209ENST00000510638 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
NFKB1-209ENST00000510638 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
NFKB1-209ENST00000510638 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
NFKB1-209ENST00000510638 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
NFKB1-209ENST00000510638 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-209ENST00000510638 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
NFKB1-209ENST00000510638 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
NFKB1-209ENST00000510638 KCNA6P17658 529 aa12.12□□□□□ -0.47
NFKB1-209ENST00000510638 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
NFKB1-209ENST00000510638 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
NFKB1-209ENST00000510638 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-209ENST00000510638 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
NFKB1-209ENST00000510638 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
NFKB1-209ENST00000510638 ASXL1Q8IXJ9 1541 aa12.11□□□□□ -0.47
NFKB1-209ENST00000510638 RGS12O14924 1447 aa12.11□□□□□ -0.47
NFKB1-209ENST00000510638 TECPR2O15040 1411 aa12.11□□□□□ -0.47
NFKB1-209ENST00000510638 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
NFKB1-209ENST00000510638 MSH6P52701 1360 aa12.09□□□□□ -0.47
NFKB1-209ENST00000510638 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
NFKB1-209ENST00000510638 CHD2O14647 1828 aaKnown RBP12.09□□□□□ -0.47
NFKB1-209ENST00000510638 DLC1Q96QB1 1528 aa12.08□□□□□ -0.48
NFKB1-209ENST00000510638 TMF1P82094 1093 aa12.08□□□□□ -0.48
NFKB1-209ENST00000510638 PTPRUQ92729 1446 aa12.08□□□□□ -0.48
NFKB1-209ENST00000510638 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
NFKB1-209ENST00000510638 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-209ENST00000510638 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
NFKB1-209ENST00000510638 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
NFKB1-209ENST00000510638 WAPLQ7Z5K2 1190 aa12.07□□□□□ -0.48
NFKB1-209ENST00000510638 PROSER2Q86WR7 435 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-209ENST00000510638 HIRIP3Q9BW71 556 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-209ENST00000510638 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
NFKB1-209ENST00000510638 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
NFKB1-209ENST00000510638 EP400Q96L91 3159 aa12.06□□□□□ -0.48
NFKB1-209ENST00000510638 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
NFKB1-209ENST00000510638 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
NFKB1-209ENST00000510638 TESK2Q96S53 571 aa12.05□□□□□ -0.48
NFKB1-209ENST00000510638 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
NFKB1-209ENST00000510638 EVC2Q86UK5 1308 aa12.05□□□□□ -0.48
NFKB1-209ENST00000510638 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-209ENST00000510638 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
NFKB1-209ENST00000510638 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
NFKB1-209ENST00000510638 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-209ENST00000510638 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-209ENST00000510638 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
NFKB1-209ENST00000510638 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-209ENST00000510638 AFF2P51816 1311 aa12.02□□□□□ -0.49
NFKB1-209ENST00000510638 XRN1Q8IZH2 1706 aaKnown RBP12.02□□□□□ -0.49
NFKB1-209ENST00000510638 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-209ENST00000510638 NCOA3Q9Y6Q9 1424 aa12.02□□□□□ -0.49
NFKB1-209ENST00000510638 KNDC1Q76NI1 1749 aa12.01□□□□□ -0.49
NFKB1-209ENST00000510638 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
NFKB1-209ENST00000510638 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
NFKB1-209ENST00000510638 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
NFKB1-209ENST00000510638 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
NFKB1-209ENST00000510638 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
NFKB1-209ENST00000510638 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
NFKB1-209ENST00000510638 C19orf44Q9H6X5 657 aa11.99□□□□□ -0.49
NFKB1-209ENST00000510638 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
NFKB1-209ENST00000510638 ARHGEF28Q8N1W1 1705 aaKnown RBP11.99□□□□□ -0.49
NFKB1-209ENST00000510638 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
NFKB1-209ENST00000510638 KIF7Q2M1P5 1343 aa11.98□□□□□ -0.49
NFKB1-209ENST00000510638 ATF3P18847 181 aa11.98□□□□□ -0.49
NFKB1-209ENST00000510638 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
NFKB1-209ENST00000510638 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
NFKB1-209ENST00000510638 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-209ENST00000510638 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
NFKB1-209ENST00000510638 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
NFKB1-209ENST00000510638 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
NFKB1-209ENST00000510638 QRICH2Q9H0J4 1663 aa11.96□□□□□ -0.5
NFKB1-209ENST00000510638 DCCP43146 1447 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 ADGRB2O60241 1585 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 TMC1Q8TDI8 760 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
NFKB1-209ENST00000510638 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 TULP4Q9NRJ4 1543 aa11.94□□□□□ -0.5
NFKB1-209ENST00000510638 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
NFKB1-209ENST00000510638 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
NFKB1-209ENST00000510638 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
NFKB1-209ENST00000510638 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
NFKB1-209ENST00000510638 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
NFKB1-209ENST00000510638 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
NFKB1-209ENST00000510638 HDGFL2Q7Z4V5 671 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-209ENST00000510638 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
NFKB1-209ENST00000510638 BRWD3Q6RI45 1802 aa11.9□□□□□ -0.5
NFKB1-209ENST00000510638 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
NFKB1-209ENST00000510638 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
NFKB1-209ENST00000510638 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-209ENST00000510638 ESCO1Q5FWF5 840 aa11.89□□□□□ -0.51
NFKB1-209ENST00000510638 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
NFKB1-209ENST00000510638 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
NFKB1-209ENST00000510638 ATP7BP35670 1465 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms