RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
SSBP2-214ENST00000510060 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
SSBP2-214ENST00000510060 ABCC9O60706 1549 aa11.86□□□□□ -0.51
SSBP2-214ENST00000510060 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
SSBP2-214ENST00000510060 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
SSBP2-214ENST00000510060 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
SSBP2-214ENST00000510060 NDUFV2P19404 249 aa11.84□□□□□ -0.51
SSBP2-214ENST00000510060 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-214ENST00000510060 SPTLC1O15269 473 aa11.83□□□□□ -0.52
SSBP2-214ENST00000510060 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
SSBP2-214ENST00000510060 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
SSBP2-214ENST00000510060 MMP16P51512 607 aa11.82□□□□□ -0.52
SSBP2-214ENST00000510060 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
SSBP2-214ENST00000510060 MTMR2Q13614 643 aa11.81□□□□□ -0.52
SSBP2-214ENST00000510060 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
SSBP2-214ENST00000510060 RIC3Q7Z5B4 369 aa11.81□□□□□ -0.52
SSBP2-214ENST00000510060 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
SSBP2-214ENST00000510060 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
SSBP2-214ENST00000510060 SLC19A1P41440 591 aa11.8□□□□□ -0.52
SSBP2-214ENST00000510060 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
SSBP2-214ENST00000510060 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
SSBP2-214ENST00000510060 FCF1Q9Y324 198 aaKnown RBP11.8□□□□□ -0.52
SSBP2-214ENST00000510060 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
SSBP2-214ENST00000510060 JUNDP17535 347 aa11.78□□□□□ -0.52
SSBP2-214ENST00000510060 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
SSBP2-214ENST00000510060 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
SSBP2-214ENST00000510060 RPIAP49247 311 aa11.76□□□□□ -0.53
SSBP2-214ENST00000510060 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
SSBP2-214ENST00000510060 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-214ENST00000510060 ZBTB24O43167 697 aaPredicted RBP11.75□□□□□ -0.53
SSBP2-214ENST00000510060 FAM117AQ9C073 453 aa11.75□□□□□ -0.53
SSBP2-214ENST00000510060 SH3D19Q5HYK7 790 aa11.74□□□□□ -0.53
SSBP2-214ENST00000510060 DESI1Q6ICB0 168 aa11.74□□□□□ -0.53
SSBP2-214ENST00000510060 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
SSBP2-214ENST00000510060 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
SSBP2-214ENST00000510060 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
SSBP2-214ENST00000510060 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
SSBP2-214ENST00000510060 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
SSBP2-214ENST00000510060 HRCP23327 699 aa11.72□□□□□ -0.53
SSBP2-214ENST00000510060 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
SSBP2-214ENST00000510060 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
SSBP2-214ENST00000510060 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
SSBP2-214ENST00000510060 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
SSBP2-214ENST00000510060 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
SSBP2-214ENST00000510060 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
SSBP2-214ENST00000510060 CSPP1Q1MSJ5 1256 aa11.71□□□□□ -0.53
SSBP2-214ENST00000510060 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-214ENST00000510060 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-214ENST00000510060 PTPRNQ16849 979 aa11.7□□□□□ -0.54
SSBP2-214ENST00000510060 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-214ENST00000510060 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-214ENST00000510060 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
SSBP2-214ENST00000510060 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-214ENST00000510060 NUDT12Q9BQG2 462 aa11.7□□□□□ -0.54
SSBP2-214ENST00000510060 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
SSBP2-214ENST00000510060 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
SSBP2-214ENST00000510060 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
SSBP2-214ENST00000510060 LILRB3O75022 631 aa11.68□□□□□ -0.54
SSBP2-214ENST00000510060 CCNYL3P0C7X3 344 aa11.68□□□□□ -0.54
SSBP2-214ENST00000510060 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
SSBP2-214ENST00000510060 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
SSBP2-214ENST00000510060 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-214ENST00000510060 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
SSBP2-214ENST00000510060 QPCTQ16769 361 aa11.65□□□□□ -0.54
SSBP2-214ENST00000510060 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
SSBP2-214ENST00000510060 TRIM32Q13049 653 aa11.64□□□□□ -0.55
SSBP2-214ENST00000510060 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
SSBP2-214ENST00000510060 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
SSBP2-214ENST00000510060 GFRA3O60609 400 aa11.63□□□□□ -0.55
SSBP2-214ENST00000510060 LYPD8Q6UX82 237 aa11.63□□□□□ -0.55
SSBP2-214ENST00000510060 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PRR20EP86478 221 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PRR20CP86479 221 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PRR20DP86480 221 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PRR20BP86481 221 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PRR20AP86496 221 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
SSBP2-214ENST00000510060 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
SSBP2-214ENST00000510060 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
SSBP2-214ENST00000510060 TSC1Q92574 1164 aa11.61□□□□□ -0.55
SSBP2-214ENST00000510060 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSBP2-214ENST00000510060 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
SSBP2-214ENST00000510060 WNT7BP56706 349 aa11.59□□□□□ -0.55
SSBP2-214ENST00000510060 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
SSBP2-214ENST00000510060 PPP2R2DQ66LE6 453 aa11.58□□□□□ -0.56
SSBP2-214ENST00000510060 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
SSBP2-214ENST00000510060 GDF9O60383 454 aa11.57□□□□□ -0.56
SSBP2-214ENST00000510060 TRIM67Q6ZTA4 783 aa11.57□□□□□ -0.56
SSBP2-214ENST00000510060 CTHP32929 405 aa11.56□□□□□ -0.56
SSBP2-214ENST00000510060 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
SSBP2-214ENST00000510060 WNT7AO00755 349 aa11.55□□□□□ -0.56
SSBP2-214ENST00000510060 FOXC1Q12948 553 aa11.55□□□□□ -0.56
SSBP2-214ENST00000510060 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
SSBP2-214ENST00000510060 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
SSBP2-214ENST00000510060 Q6ZNB5 142 aa11.54□□□□□ -0.56
SSBP2-214ENST00000510060 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
SSBP2-214ENST00000510060 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
SSBP2-214ENST00000510060 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
SSBP2-214ENST00000510060 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
SSBP2-214ENST00000510060 CYP4X1Q8N118 509 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms