RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 C19orf44Q9H6X5 657 aa27.62■■■□□ 2.01
CCND3-212ENST00000510058 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
CCND3-212ENST00000510058 ADGRB2O60241 1585 aa27.61■■■□□ 2.01
CCND3-212ENST00000510058 CDC42BPGQ6DT37 1551 aa27.61■■■□□ 2.01
CCND3-212ENST00000510058 QRICH2Q9H0J4 1663 aa27.61■■■□□ 2.01
CCND3-212ENST00000510058 CENPJQ9HC77 1338 aaPredicted RBP27.61■■■□□ 2.01
CCND3-212ENST00000510058 RBM33Q96EV2 1170 aaKnown RBP27.58■■■□□ 2.01
CCND3-212ENST00000510058 CADPS2Q86UW7 1296 aa27.56■■■□□ 2
CCND3-212ENST00000510058 USP47Q96K76 1375 aa27.56■■■□□ 2
CCND3-212ENST00000510058 SBNO2Q9Y2G9 1366 aa27.56■■■□□ 2
CCND3-212ENST00000510058 SLC24A1O60721 1099 aa27.54■■■□□ 2
CCND3-212ENST00000510058 ATF3P18847 181 aa27.54■■■□□ 2
CCND3-212ENST00000510058 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
CCND3-212ENST00000510058 TOM1O60784 492 aa27.51■■□□□ 1.99
CCND3-212ENST00000510058 FMN2Q9NZ56 1722 aa27.5■■□□□ 1.99
CCND3-212ENST00000510058 MINK1Q8N4C8 1332 aaPredicted RBP27.48■■□□□ 1.99
CCND3-212ENST00000510058 EIF4G2P78344 907 aaKnown RBP eCLIP27.48■■□□□ 1.99
CCND3-212ENST00000510058 ST20-MTHFSA0A0A6YYL1 179 aa27.45■■□□□ 1.98
CCND3-212ENST00000510058 MST1RQ04912 1400 aa27.44■■□□□ 1.98
CCND3-212ENST00000510058 UBAP1LF5GYI3 381 aa27.44■■□□□ 1.98
CCND3-212ENST00000510058 WASLO00401 505 aaPredicted RBP27.44■■□□□ 1.98
CCND3-212ENST00000510058 TULP4Q9NRJ4 1543 aa27.44■■□□□ 1.98
CCND3-212ENST00000510058 ANKARQ7Z5J8 1434 aa27.43■■□□□ 1.98
CCND3-212ENST00000510058 EVC2Q86UK5 1308 aa27.42■■□□□ 1.98
CCND3-212ENST00000510058 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
CCND3-212ENST00000510058 SLAIN2Q9P270 581 aa27.41■■□□□ 1.98
CCND3-212ENST00000510058 ITSN1Q15811 1721 aa27.41■■□□□ 1.98
CCND3-212ENST00000510058 C1orf167Q5SNV9 1468 aa27.39■■□□□ 1.98
CCND3-212ENST00000510058 TESK2Q96S53 571 aa27.39■■□□□ 1.98
CCND3-212ENST00000510058 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
CCND3-212ENST00000510058 USP32Q8NFA0 1604 aa27.37■■□□□ 1.97
CCND3-212ENST00000510058 HSPA5P11021 654 aaKnown RBP27.36■■□□□ 1.97
CCND3-212ENST00000510058 KIF1AQ12756 1690 aa27.36■■□□□ 1.97
CCND3-212ENST00000510058 TMF1P82094 1093 aa27.35■■□□□ 1.97
CCND3-212ENST00000510058 PUS7Q96PZ0 661 aaKnown RBP27.35■■□□□ 1.97
CCND3-212ENST00000510058 ROBO1Q9Y6N7 1651 aa27.35■■□□□ 1.97
CCND3-212ENST00000510058 ATP7BP35670 1465 aa27.34■■□□□ 1.97
CCND3-212ENST00000510058 SRPK2P78362 688 aaKnown RBP27.34■■□□□ 1.97
CCND3-212ENST00000510058 RGPD8O14715 1765 aaPredicted RBP27.34■■□□□ 1.97
CCND3-212ENST00000510058 TOPAZ1Q8N9V7 1692 aa27.33■■□□□ 1.97
CCND3-212ENST00000510058 CDCA8Q53HL2 280 aa27.32■■□□□ 1.96
CCND3-212ENST00000510058 ATAD2Q6PL18 1390 aa27.32■■□□□ 1.96
CCND3-212ENST00000510058 FBXO41Q8TF61 875 aa27.31■■□□□ 1.96
CCND3-212ENST00000510058 PIP4K2BP78356 416 aa27.29■■□□□ 1.96
CCND3-212ENST00000510058 NUDT16Q96DE0 195 aaKnown RBP27.29■■□□□ 1.96
CCND3-212ENST00000510058 NUTM2FA1L443 756 aa27.28■■□□□ 1.96
CCND3-212ENST00000510058 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
CCND3-212ENST00000510058 PRR36Q9H6K5 1346 aa27.27■■□□□ 1.96
CCND3-212ENST00000510058 SCAF1Q9H7N4 1312 aaKnown RBP27.27■■□□□ 1.96
CCND3-212ENST00000510058 ESCO1Q5FWF5 840 aa27.27■■□□□ 1.96
CCND3-212ENST00000510058 BRINP3Q76B58 766 aa27.27■■□□□ 1.96
CCND3-212ENST00000510058 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
CCND3-212ENST00000510058 NHSL1Q5SYE7 1610 aa27.26■■□□□ 1.95
CCND3-212ENST00000510058 DISP3Q9P2K9 1392 aa27.25■■□□□ 1.95
CCND3-212ENST00000510058 AHDC1Q5TGY3 1603 aaPredicted RBP27.24■■□□□ 1.95
CCND3-212ENST00000510058 NINLQ9Y2I6 1382 aa27.23■■□□□ 1.95
CCND3-212ENST00000510058 ORAI2Q96SN7 254 aa27.23■■□□□ 1.95
CCND3-212ENST00000510058 PHF8Q9UPP1 1060 aa27.23■■□□□ 1.95
CCND3-212ENST00000510058 PPIP5K1Q6PFW1 1433 aa27.23■■□□□ 1.95
CCND3-212ENST00000510058 NPHP3Q7Z494 1330 aa27.2■■□□□ 1.95
CCND3-212ENST00000510058 PLEKHG3A1L390 1219 aa27.19■■□□□ 1.94
CCND3-212ENST00000510058 PHLPP1O60346 1717 aa27.19■■□□□ 1.94
CCND3-212ENST00000510058 POLR3AO14802 1390 aaPredicted RBP27.17■■□□□ 1.94
CCND3-212ENST00000510058 NGDNQ8NEJ9 315 aaKnown RBP27.14■■□□□ 1.94
CCND3-212ENST00000510058 PMFBP1Q8TBY8 1022 aa27.14■■□□□ 1.94
CCND3-212ENST00000510058 AKAP12Q02952 1782 aa27.14■■□□□ 1.93
CCND3-212ENST00000510058 CABP1Q9NZU7 370 aa27.13■■□□□ 1.93
CCND3-212ENST00000510058 MYOM1P52179 1685 aa27.12■■□□□ 1.93
CCND3-212ENST00000510058 FOXO3O43524 673 aa27.12■■□□□ 1.93
CCND3-212ENST00000510058 PXDNQ92626 1479 aa27.12■■□□□ 1.93
CCND3-212ENST00000510058 COL16A1Q07092 1604 aaPredicted RBP27.12■■□□□ 1.93
CCND3-212ENST00000510058 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
CCND3-212ENST00000510058 ACEP12821 1306 aa27.11■■□□□ 1.93
CCND3-212ENST00000510058 SOS2Q07890 1332 aaPredicted RBP27.11■■□□□ 1.93
CCND3-212ENST00000510058 PSME1Q06323 249 aa27.1■■□□□ 1.93
CCND3-212ENST00000510058 TMC1Q8TDI8 760 aa27.1■■□□□ 1.93
CCND3-212ENST00000510058 ZNF692Q9BU19 519 aaPredicted RBP27.1■■□□□ 1.93
CCND3-212ENST00000510058 MON2Q7Z3U7 1717 aa27.09■■□□□ 1.93
CCND3-212ENST00000510058 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
CCND3-212ENST00000510058 TERF2IPQ9NYB0 399 aa27.08■■□□□ 1.93
CCND3-212ENST00000510058 KIF7Q2M1P5 1343 aa27.07■■□□□ 1.92
CCND3-212ENST00000510058 SBNO1A3KN83 1393 aa27.07■■□□□ 1.92
CCND3-212ENST00000510058 TRPM3Q9HCF6 1732 aaPredicted RBP27.07■■□□□ 1.92
CCND3-212ENST00000510058 KRT28Q7Z3Y7 464 aa27.06■■□□□ 1.92
CCND3-212ENST00000510058 HDGFL2Q7Z4V5 671 aaPredicted RBP27.06■■□□□ 1.92
CCND3-212ENST00000510058 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
CCND3-212ENST00000510058 LRRC59Q96AG4 307 aaKnown RBP27.05■■□□□ 1.92
CCND3-212ENST00000510058 SLC12A5Q9H2X9 1139 aa27.05■■□□□ 1.92
CCND3-212ENST00000510058 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
CCND3-212ENST00000510058 USP6P35125 1406 aa27.05■■□□□ 1.92
CCND3-212ENST00000510058 CD163L1Q9NR16 1453 aa27.05■■□□□ 1.92
CCND3-212ENST00000510058 HSPA1LP34931 641 aa27.04■■□□□ 1.92
CCND3-212ENST00000510058 CCDC7Q96M83 1385 aa27.04■■□□□ 1.92
CCND3-212ENST00000510058 DDX17Q92841 729 aaKnown RBP27.03■■□□□ 1.92
CCND3-212ENST00000510058 POLR3GLQ9BT43 218 aa27.03■■□□□ 1.92
CCND3-212ENST00000510058 NRKQ7Z2Y5 1582 aa27.02■■□□□ 1.92
CCND3-212ENST00000510058 KTN1Q86UP2 1357 aaKnown RBP27.02■■□□□ 1.92
CCND3-212ENST00000510058 TNS3Q68CZ2 1445 aa27.01■■□□□ 1.91
CCND3-212ENST00000510058 A0A1W2PP64 1363 aa27.01■■□□□ 1.91
CCND3-212ENST00000510058 SHPRHQ149N8 1683 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms