RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
SNCAIP-214ENST00000510003 KANK1Q14678 1352 aa18.58■□□□□ 0.57
SNCAIP-214ENST00000510003 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
SNCAIP-214ENST00000510003 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.56
SNCAIP-214ENST00000510003 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
SNCAIP-214ENST00000510003 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 MYOM2P54296 1465 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 MCM4P33991 863 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 ISY1Q9ULR0 285 aaKnown RBP18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 TET3O43151 1660 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 ABCC1P33527 1531 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 CLCN1P35523 988 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 XRCC6P12956 609 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNCAIP-214ENST00000510003 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
SNCAIP-214ENST00000510003 FANCAO15360 1455 aa18.52■□□□□ 0.56
SNCAIP-214ENST00000510003 MRE11P49959 708 aa18.5■□□□□ 0.55
SNCAIP-214ENST00000510003 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 USP32Q8NFA0 1604 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
SNCAIP-214ENST00000510003 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-214ENST00000510003 RLBP1P12271 317 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 TRAK2O60296 914 aa18.46■□□□□ 0.55
SNCAIP-214ENST00000510003 ZFYVE16Q7Z3T8 1539 aa18.46■□□□□ 0.55
SNCAIP-214ENST00000510003 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NEO1Q92859 1461 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 ZKSCAN2Q63HK3 967 aa18.43■□□□□ 0.54
SNCAIP-214ENST00000510003 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
SNCAIP-214ENST00000510003 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 PTMSP20962 102 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 HSCBQ8IWL3 235 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP74Q9C0B2 1584 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 DZIP1LQ8IYY4 767 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 SNX21Q969T3 373 aa18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 CIZ1Q9ULV3 898 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 DDIT3P35638 169 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 NAP1L5Q96NT1 182 aaPredicted RBP18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 TNNQ9UQP3 1299 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 KIF1BO60333 1816 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 PANK2Q9BZ23 570 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-214ENST00000510003 NSD2O96028 1365 aa18.38■□□□□ 0.53
SNCAIP-214ENST00000510003 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 GZF1Q9H116 711 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
SNCAIP-214ENST00000510003 ESPNB1AK53 854 aa18.34■□□□□ 0.53
SNCAIP-214ENST00000510003 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
SNCAIP-214ENST00000510003 GBP4Q96PP9 640 aa18.33■□□□□ 0.53
SNCAIP-214ENST00000510003 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms