RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
SPOCK1-207ENST00000509978 HLA-CQ95604 372 aa14.11□□□□□ -0.15
SPOCK1-207ENST00000509978 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
SPOCK1-207ENST00000509978 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
SPOCK1-207ENST00000509978 ALG2Q9H553 416 aa14.1□□□□□ -0.15
SPOCK1-207ENST00000509978 CFAP99D6REC4 459 aa14.09□□□□□ -0.15
SPOCK1-207ENST00000509978 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
SPOCK1-207ENST00000509978 ARHGAP33O14559 1287 aa14.08□□□□□ -0.16
SPOCK1-207ENST00000509978 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
SPOCK1-207ENST00000509978 LRRN4Q8WUT4 740 aa14.08□□□□□ -0.16
SPOCK1-207ENST00000509978 SOX11P35716 441 aa14.07□□□□□ -0.16
SPOCK1-207ENST00000509978 PPP1R12CQ9BZL4 782 aa14.07□□□□□ -0.16
SPOCK1-207ENST00000509978 PATL2C9JE40 543 aaKnown RBP14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 C6orf229H3BNL8 230 aa14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 PSEN2P49810 448 aa14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 FUT2Q10981 343 aa14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
SPOCK1-207ENST00000509978 LAPTM4BQ86VI4 370 aa14.05□□□□□ -0.16
SPOCK1-207ENST00000509978 VAC14Q08AM6 782 aa14.04□□□□□ -0.16
SPOCK1-207ENST00000509978 SEPT9Q9UHD8 586 aaPredicted RBP14.04□□□□□ -0.16
SPOCK1-207ENST00000509978 TSC1Q92574 1164 aa14.02□□□□□ -0.17
SPOCK1-207ENST00000509978 CFHP08603 1231 aa14.01□□□□□ -0.17
SPOCK1-207ENST00000509978 DESI1Q6ICB0 168 aa14.01□□□□□ -0.17
SPOCK1-207ENST00000509978 PBX2P40425 430 aa14□□□□□ -0.17
SPOCK1-207ENST00000509978 PRR7Q8TB68 274 aa14□□□□□ -0.17
SPOCK1-207ENST00000509978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 BRD1O95696 1058 aa13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 POTEEQ6S8J3 1075 aa13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 EPS8L1Q8TE68 723 aa13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
SPOCK1-207ENST00000509978 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
SPOCK1-207ENST00000509978 RETREG3Q86VR2 466 aa13.98□□□□□ -0.17
SPOCK1-207ENST00000509978 RFX1P22670 979 aa13.97□□□□□ -0.17
SPOCK1-207ENST00000509978 KCNA1Q09470 495 aa13.97□□□□□ -0.17
SPOCK1-207ENST00000509978 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
SPOCK1-207ENST00000509978 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
SPOCK1-207ENST00000509978 GZF1Q9H116 711 aaPredicted RBP13.97□□□□□ -0.17
SPOCK1-207ENST00000509978 TMCO4Q5TGY1 634 aa13.96□□□□□ -0.17
SPOCK1-207ENST00000509978 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.17
SPOCK1-207ENST00000509978 NR6A1Q15406 480 aa13.95□□□□□ -0.18
SPOCK1-207ENST00000509978 Q3C1V9 767 aa13.95□□□□□ -0.18
SPOCK1-207ENST00000509978 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
SPOCK1-207ENST00000509978 UCN2Q96RP3 112 aa13.95□□□□□ -0.18
SPOCK1-207ENST00000509978 MORN1Q5T089 497 aa13.94□□□□□ -0.18
SPOCK1-207ENST00000509978 NBPF3Q9H094 633 aa13.94□□□□□ -0.18
SPOCK1-207ENST00000509978 TFIP11Q9UBB9 837 aaKnown RBP13.94□□□□□ -0.18
SPOCK1-207ENST00000509978 BHMG1C9JSJ3 638 aaPredicted RBP13.93□□□□□ -0.18
SPOCK1-207ENST00000509978 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
SPOCK1-207ENST00000509978 ERBB3P21860 1342 aa13.92□□□□□ -0.18
SPOCK1-207ENST00000509978 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SPOCK1-207ENST00000509978 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
SPOCK1-207ENST00000509978 ATG7O95352 703 aa13.92□□□□□ -0.18
SPOCK1-207ENST00000509978 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
SPOCK1-207ENST00000509978 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPOCK1-207ENST00000509978 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
SPOCK1-207ENST00000509978 LYPD8Q6UX82 237 aa13.91□□□□□ -0.18
SPOCK1-207ENST00000509978 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
SPOCK1-207ENST00000509978 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
SPOCK1-207ENST00000509978 SLC27A5Q9Y2P5 690 aa13.89□□□□□ -0.19
SPOCK1-207ENST00000509978 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
SPOCK1-207ENST00000509978 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
SPOCK1-207ENST00000509978 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
SPOCK1-207ENST00000509978 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
SPOCK1-207ENST00000509978 TK2O00142 265 aa13.87□□□□□ -0.19
SPOCK1-207ENST00000509978 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
SPOCK1-207ENST00000509978 NR1H3Q13133 447 aa13.86□□□□□ -0.19
SPOCK1-207ENST00000509978 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
SPOCK1-207ENST00000509978 ATP9BO43861 1147 aa13.84□□□□□ -0.19
SPOCK1-207ENST00000509978 RNF40O75150 1001 aa13.84□□□□□ -0.19
SPOCK1-207ENST00000509978 TBC1D9Q6ZT07 1266 aa13.83□□□□□ -0.2
SPOCK1-207ENST00000509978 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
SPOCK1-207ENST00000509978 TMEM88BA6NKF7 163 aa13.82□□□□□ -0.2
SPOCK1-207ENST00000509978 USB1Q9BQ65 265 aaKnown RBP13.82□□□□□ -0.2
SPOCK1-207ENST00000509978 VRTNQ9H8Y1 702 aa13.82□□□□□ -0.2
SPOCK1-207ENST00000509978 ZC3H4Q9UPT8 1303 aaKnown RBP13.82□□□□□ -0.2
SPOCK1-207ENST00000509978 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
SPOCK1-207ENST00000509978 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
SPOCK1-207ENST00000509978 LRCH3Q96II8 777 aa13.81□□□□□ -0.2
SPOCK1-207ENST00000509978 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
SPOCK1-207ENST00000509978 ELOAQ14241 798 aaKnown RBP13.8□□□□□ -0.2
SPOCK1-207ENST00000509978 BRICD5Q6PL45 260 aa13.8□□□□□ -0.2
SPOCK1-207ENST00000509978 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
SPOCK1-207ENST00000509978 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
SPOCK1-207ENST00000509978 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
SPOCK1-207ENST00000509978 FKBPLQ9UIM3 349 aa13.79□□□□□ -0.2
SPOCK1-207ENST00000509978 FBXO45P0C2W1 286 aa13.78□□□□□ -0.2
SPOCK1-207ENST00000509978 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
SPOCK1-207ENST00000509978 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
SPOCK1-207ENST00000509978 RNF19BQ6ZMZ0 732 aa13.77□□□□□ -0.21
SPOCK1-207ENST00000509978 BLOC1S3Q6QNY0 202 aa13.76□□□□□ -0.21
SPOCK1-207ENST00000509978 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
SPOCK1-207ENST00000509978 PTPRNQ16849 979 aa13.74□□□□□ -0.21
SPOCK1-207ENST00000509978 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
SPOCK1-207ENST00000509978 CARNS1A5YM72 827 aa13.73□□□□□ -0.21
SPOCK1-207ENST00000509978 EMP3P54852 163 aa13.73□□□□□ -0.21
SPOCK1-207ENST00000509978 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
SPOCK1-207ENST00000509978 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms