RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.122e-6■■■□□ 16.9
NEK1-204ENST00000509912 SEC24BO95487 1268 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
NEK1-204ENST00000509912 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
NEK1-204ENST00000509912 MYO5CQ9NQX4 1742 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 PLEKHH2Q8IVE3 1493 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 PLCH2O75038 1416 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 CD109Q6YHK3 1445 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 POTEFA5A3E0 1075 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 QPCTQ16769 361 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
NEK1-204ENST00000509912 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
NEK1-204ENST00000509912 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 MLH3Q9UHC1 1453 aa8.05□□□□□ -1.12
NEK1-204ENST00000509912 CASKIN1Q8WXD9 1431 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 RAD21O60216 631 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 ARHGEF12Q9NZN5 1544 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 PREX2Q70Z35 1606 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 C3orf80F5H4A9 247 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 RFX1P22670 979 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 IRF5Q13568 498 aa8.04□□□□□ -1.12
NEK1-204ENST00000509912 KIAA1107Q9UPP5 1409 aa8.03□□□□□ -1.12
NEK1-204ENST00000509912 RFC5P40937 340 aa8.03□□□□□ -1.12
NEK1-204ENST00000509912 ABL2P42684 1182 aa8.03□□□□□ -1.12
NEK1-204ENST00000509912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.03□□□□□ -1.12
NEK1-204ENST00000509912 CLK2P49760 499 aaKnown RBP8.03□□□□□ -1.12
NEK1-204ENST00000509912 TBC1D2Q9BYX2 928 aa8.03□□□□□ -1.12
NEK1-204ENST00000509912 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
NEK1-204ENST00000509912 FOXD4L5Q5VV16 416 aaPredicted RBP8.02□□□□□ -1.13
NEK1-204ENST00000509912 MTMR14Q8NCE2 650 aa8.02□□□□□ -1.13
NEK1-204ENST00000509912 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.13
NEK1-204ENST00000509912 FOXD4L4Q8WXT5 416 aaPredicted RBP8.02□□□□□ -1.13
NEK1-204ENST00000509912 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
NEK1-204ENST00000509912 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.13
NEK1-204ENST00000509912 CCDC9Q9Y3X0 531 aaKnown RBP8.01□□□□□ -1.13
NEK1-204ENST00000509912 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
NEK1-204ENST00000509912 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
NEK1-204ENST00000509912 KIF14Q15058 1648 aa8.01□□□□□ -1.13
NEK1-204ENST00000509912 PXYLP1Q8TE99 480 aa8.01□□□□□ -1.13
NEK1-204ENST00000509912 PTCD2Q8WV60 388 aaKnown RBP8□□□□□ -1.13
NEK1-204ENST00000509912 RTEL1-TNFRSF6BF6WH68 1400 aa8□□□□□ -1.13
NEK1-204ENST00000509912 FANCAO15360 1455 aa7.99□□□□□ -1.13
NEK1-204ENST00000509912 PCF11O94913 1555 aaKnown RBP7.99□□□□□ -1.13
NEK1-204ENST00000509912 HLA-CQ95604 372 aa7.99□□□□□ -1.13
NEK1-204ENST00000509912 PCDHB15Q9Y5E8 787 aa7.99□□□□□ -1.13
NEK1-204ENST00000509912 TROQ12816 1431 aaPredicted RBP7.99□□□□□ -1.13
NEK1-204ENST00000509912 COL17A1Q9UMD9 1497 aaPredicted RBP7.99□□□□□ -1.13
NEK1-204ENST00000509912 NDUFV2P19404 249 aa7.99□□□□□ -1.13
NEK1-204ENST00000509912 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
NEK1-204ENST00000509912 ADGRL1O94910 1474 aa7.99□□□□□ -1.13
NEK1-204ENST00000509912 SMAPO00193 183 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 ADGRG1Q9Y653 693 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
NEK1-204ENST00000509912 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 POGZQ7Z3K3 1410 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 PLXNC1O60486 1568 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 FER1L4A9Z1Z3 1794 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 ZNF142P52746 1687 aaPredicted RBP7.98□□□□□ -1.13
NEK1-204ENST00000509912 ZFYVE16Q7Z3T8 1539 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 AKNAQ7Z591 1439 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 NUDT7P0C024 238 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
NEK1-204ENST00000509912 ARHGEF5Q12774 1597 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 KDM4FA0A1W2PPD8 638 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 C3orf67Q6ZVT6 689 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 GZF1Q9H116 711 aaPredicted RBP7.97□□□□□ -1.13
NEK1-204ENST00000509912 ADGBQ8N7X0 1667 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 ARHGAP35Q9NRY4 1499 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 NPATQ14207 1427 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
NEK1-204ENST00000509912 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 ANO8Q9HCE9 1232 aaPredicted RBP7.97□□□□□ -1.13
NEK1-204ENST00000509912 ABCC1P33527 1531 aa7.97□□□□□ -1.13
NEK1-204ENST00000509912 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.13
NEK1-204ENST00000509912 CALR3Q96L12 384 aaKnown RBP7.96□□□□□ -1.13
NEK1-204ENST00000509912 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.13
NEK1-204ENST00000509912 EIF2AK4Q9P2K8 1649 aaKnown RBP7.96□□□□□ -1.13
NEK1-204ENST00000509912 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.13
NEK1-204ENST00000509912 TTBK1Q5TCY1 1321 aaPredicted RBP7.96□□□□□ -1.14
NEK1-204ENST00000509912 HECW2Q9P2P5 1572 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 PHF14O94880 888 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 CABLES1Q8TDN4 633 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 ATP10AO60312 1499 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 CLIP1P30622 1438 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 C9orf84Q5VXU9 1444 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 PREX1Q8TCU6 1659 aa7.96□□□□□ -1.14
NEK1-204ENST00000509912 INO80Q9ULG1 1556 aaPredicted RBP7.96□□□□□ -1.14
NEK1-204ENST00000509912 KDM5DQ9BY66 1539 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 DDX11L8A8MPP1 907 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 AP1G2O75843 785 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 GLMNQ92990 594 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 LRRIQ1Q96JM4 1722 aa7.95□□□□□ -1.14
NEK1-204ENST00000509912 CDC42BPBQ9Y5S2 1711 aa7.94□□□□□ -1.14
NEK1-204ENST00000509912 ZC3H13Q5T200 1668 aaKnown RBP7.94□□□□□ -1.14
NEK1-204ENST00000509912 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
NEK1-204ENST00000509912 ADAMTS19Q8TE59 1207 aa7.94□□□□□ -1.14
NEK1-204ENST00000509912 TSC1Q92574 1164 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms