RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 IQGAP3Q86VI3 1631 aa21.41■■□□□ 1.02
HMGCR-208ENST00000509431 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
HMGCR-208ENST00000509431 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
HMGCR-208ENST00000509431 SLIT2O94813 1529 aa21.39■■□□□ 1.02
HMGCR-208ENST00000509431 ANKRD50Q9ULJ7 1429 aa21.39■■□□□ 1.02
HMGCR-208ENST00000509431 SEPT12Q8IYM1 358 aa21.39■■□□□ 1.01
HMGCR-208ENST00000509431 E9PCH4 1651 aa21.39■■□□□ 1.01
HMGCR-208ENST00000509431 VPS8Q8N3P4 1428 aa21.38■■□□□ 1.01
HMGCR-208ENST00000509431 KRT27Q7Z3Y8 459 aa21.36■■□□□ 1.01
HMGCR-208ENST00000509431 PXDNQ92626 1479 aa21.34■■□□□ 1.01
HMGCR-208ENST00000509431 ONECUT3O60422 494 aaPredicted RBP21.34■■□□□ 1.01
HMGCR-208ENST00000509431 IFFO2Q5TF58 517 aa21.33■■□□□ 1.01
HMGCR-208ENST00000509431 R3HDM1Q15032 1099 aaKnown RBP21.31■■□□□ 1
HMGCR-208ENST00000509431 VPS72Q15906 364 aa21.31■■□□□ 1
HMGCR-208ENST00000509431 LRPPRCP42704 1394 aaKnown RBP21.3■■□□□ 1
HMGCR-208ENST00000509431 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
HMGCR-208ENST00000509431 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
HMGCR-208ENST00000509431 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
HMGCR-208ENST00000509431 PRAG1Q86YV5 1406 aa21.27■■□□□ 1
HMGCR-208ENST00000509431 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
HMGCR-208ENST00000509431 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
HMGCR-208ENST00000509431 EN1Q05925 392 aaPredicted RBP21.26■□□□□ 0.99
HMGCR-208ENST00000509431 ZNF326Q5BKZ1 582 aaKnown RBP21.26■□□□□ 0.99
HMGCR-208ENST00000509431 DISP2A7MBM2 1401 aa21.26■□□□□ 0.99
HMGCR-208ENST00000509431 ROBO2Q9HCK4 1378 aa21.24■□□□□ 0.99
HMGCR-208ENST00000509431 HFM1A2PYH4 1435 aa21.24■□□□□ 0.99
HMGCR-208ENST00000509431 FOXO3O43524 673 aa21.24■□□□□ 0.99
HMGCR-208ENST00000509431 CCDC9Q9Y3X0 531 aaKnown RBP21.23■□□□□ 0.99
HMGCR-208ENST00000509431 CDC42BPGQ6DT37 1551 aa21.22■□□□□ 0.99
HMGCR-208ENST00000509431 XPCQ01831 940 aaPredicted RBP21.21■□□□□ 0.99
HMGCR-208ENST00000509431 PLCH1Q4KWH8 1693 aa21.2■□□□□ 0.98
HMGCR-208ENST00000509431 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
HMGCR-208ENST00000509431 A0A0G2JS52 829 aa21.19■□□□□ 0.98
HMGCR-208ENST00000509431 MYT1Q01538 1121 aa21.19■□□□□ 0.98
HMGCR-208ENST00000509431 SPATA31A3Q5VYP0 1347 aa21.19■□□□□ 0.98
HMGCR-208ENST00000509431 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
HMGCR-208ENST00000509431 TNS1Q9HBL0 1735 aaKnown RBP21.16■□□□□ 0.98
HMGCR-208ENST00000509431 ADGRB2O60241 1585 aa21.15■□□□□ 0.98
HMGCR-208ENST00000509431 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
HMGCR-208ENST00000509431 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
HMGCR-208ENST00000509431 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
HMGCR-208ENST00000509431 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
HMGCR-208ENST00000509431 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
HMGCR-208ENST00000509431 NUP155O75694 1391 aa21.12■□□□□ 0.97
HMGCR-208ENST00000509431 APLP2Q06481 763 aa21.12■□□□□ 0.97
HMGCR-208ENST00000509431 PPP1R1BQ9UD71 204 aaPredicted RBP21.12■□□□□ 0.97
HMGCR-208ENST00000509431 KIF1AQ12756 1690 aa21.12■□□□□ 0.97
HMGCR-208ENST00000509431 FAM98CQ17RN3 349 aaKnown RBP21.11■□□□□ 0.97
HMGCR-208ENST00000509431 VGFO15240 615 aaPredicted RBP21.1■□□□□ 0.97
HMGCR-208ENST00000509431 CAMKK2Q96RR4 588 aa21.1■□□□□ 0.97
HMGCR-208ENST00000509431 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
HMGCR-208ENST00000509431 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
HMGCR-208ENST00000509431 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
HMGCR-208ENST00000509431 NAIPQ13075 1403 aa21.07■□□□□ 0.96
HMGCR-208ENST00000509431 TNS3Q68CZ2 1445 aa21.07■□□□□ 0.96
HMGCR-208ENST00000509431 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
HMGCR-208ENST00000509431 NRAPQ86VF7 1730 aa21.07■□□□□ 0.96
HMGCR-208ENST00000509431 KIF1BO60333 1816 aa21.06■□□□□ 0.96
HMGCR-208ENST00000509431 ABCA3Q99758 1704 aa21.06■□□□□ 0.96
HMGCR-208ENST00000509431 PSME1Q06323 249 aa21.05■□□□□ 0.96
HMGCR-208ENST00000509431 NBPF8Q3BBV2 869 aa21.05■□□□□ 0.96
HMGCR-208ENST00000509431 NBPF14Q5TI25 921 aa21.05■□□□□ 0.96
HMGCR-208ENST00000509431 ROCK1Q13464 1354 aa21.04■□□□□ 0.96
HMGCR-208ENST00000509431 RREB1Q92766 1687 aa21.04■□□□□ 0.96
HMGCR-208ENST00000509431 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
HMGCR-208ENST00000509431 ARHGEF10O15013 1369 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 FAM83GA6ND36 823 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 KCNQ2O43526 872 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 C1QTNF8P60827 252 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 CABLES1Q8TDN4 633 aa21.03■□□□□ 0.96
HMGCR-208ENST00000509431 FAM196AQ6ZSG2 479 aa21.02■□□□□ 0.96
HMGCR-208ENST00000509431 THSD7AQ9UPZ6 1657 aa21.02■□□□□ 0.95
HMGCR-208ENST00000509431 NUTM2FA1L443 756 aa21.01■□□□□ 0.95
HMGCR-208ENST00000509431 NUP188Q5SRE5 1749 aa21.01■□□□□ 0.95
HMGCR-208ENST00000509431 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
HMGCR-208ENST00000509431 SBNO1A3KN83 1393 aa21■□□□□ 0.95
HMGCR-208ENST00000509431 TRIM37O94972 964 aa20.99■□□□□ 0.95
HMGCR-208ENST00000509431 APBA3O96018 575 aa20.99■□□□□ 0.95
HMGCR-208ENST00000509431 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
HMGCR-208ENST00000509431 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
HMGCR-208ENST00000509431 SPATA31A5Q5VU36 1347 aa20.98■□□□□ 0.95
HMGCR-208ENST00000509431 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
HMGCR-208ENST00000509431 SPATA31A7Q8IWB4 1347 aa20.98■□□□□ 0.95
HMGCR-208ENST00000509431 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
HMGCR-208ENST00000509431 TECPR2O15040 1411 aa20.95■□□□□ 0.95
HMGCR-208ENST00000509431 CHD4Q14839 1912 aa20.95■□□□□ 0.94
HMGCR-208ENST00000509431 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
HMGCR-208ENST00000509431 LMOD2Q6P5Q4 547 aa20.94■□□□□ 0.94
HMGCR-208ENST00000509431 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
HMGCR-208ENST00000509431 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
HMGCR-208ENST00000509431 PPLO60437 1756 aa20.91■□□□□ 0.94
HMGCR-208ENST00000509431 WAPLQ7Z5K2 1190 aa20.91■□□□□ 0.94
HMGCR-208ENST00000509431 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
HMGCR-208ENST00000509431 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
HMGCR-208ENST00000509431 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
HMGCR-208ENST00000509431 ABCC11Q96J66 1382 aa20.87■□□□□ 0.93
HMGCR-208ENST00000509431 IFT172Q9UG01 1749 aa20.86■□□□□ 0.93
HMGCR-208ENST00000509431 STK26Q9P289 416 aa20.85■□□□□ 0.93
HMGCR-208ENST00000509431 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms