RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	TULP4	Q9NRJ4	1543 aa		13.93	□□□□□ -0.18
FBXO38-215	ENST00000509411	MET	P08581	1390 aa		13.93	□□□□□ -0.18
FBXO38-215	ENST00000509411	ADAMTS13	Q76LX8	1427 aa		13.92	□□□□□ -0.18
FBXO38-215	ENST00000509411	SLIT1	O75093	1534 aa		13.92	□□□□□ -0.18
FBXO38-215	ENST00000509411	PLEKHH1	Q9ULM0	1364 aa		13.91	□□□□□ -0.18
FBXO38-215	ENST00000509411	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
FBXO38-215	ENST00000509411	LRPPRC	P42704	1394 aa	Known RBP	13.9	□□□□□ -0.18
FBXO38-215	ENST00000509411	TXNDC2	Q86VQ3	553 aa		13.89	□□□□□ -0.19
FBXO38-215	ENST00000509411	DLC1	Q96QB1	1528 aa		13.89	□□□□□ -0.19
FBXO38-215	ENST00000509411	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.89	□□□□□ -0.19
FBXO38-215	ENST00000509411	MED14	O60244	1454 aa		13.88	□□□□□ -0.19
FBXO38-215	ENST00000509411	PLEKHG1	Q9ULL1	1385 aa		13.88	□□□□□ -0.19
FBXO38-215	ENST00000509411	PRAM1	Q96QH2	718 aa		13.88	□□□□□ -0.19
FBXO38-215	ENST00000509411	CDCA8	Q53HL2	280 aa		13.87	□□□□□ -0.19
FBXO38-215	ENST00000509411	ABCC11	Q96J66	1382 aa		13.86	□□□□□ -0.19
FBXO38-215	ENST00000509411	WAPL	Q7Z5K2	1190 aa		13.86	□□□□□ -0.19
FBXO38-215	ENST00000509411	PTPRU	Q92729	1446 aa		13.86	□□□□□ -0.19
FBXO38-215	ENST00000509411	KNDC1	Q76NI1	1749 aa		13.86	□□□□□ -0.19
FBXO38-215	ENST00000509411	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.86	□□□□□ -0.19
FBXO38-215	ENST00000509411	PARD3	Q8TEW0	1356 aa		13.85	□□□□□ -0.19
FBXO38-215	ENST00000509411	HDGF	P51858	240 aa	Known RBP	13.85	□□□□□ -0.19
FBXO38-215	ENST00000509411	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.85	□□□□□ -0.19
FBXO38-215	ENST00000509411	CARD14	Q9BXL6	1004 aa		13.85	□□□□□ -0.19
FBXO38-215	ENST00000509411	CABP2	Q9NPB3	220 aa		13.85	□□□□□ -0.19
FBXO38-215	ENST00000509411	CC2D1B	Q5T0F9	858 aa	Known RBP	13.84	□□□□□ -0.19
FBXO38-215	ENST00000509411	TECPR2	O15040	1411 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	SLC24A1	O60721	1099 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	ANKLE2	Q86XL3	938 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	SLC26A8	Q96RN1	970 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	SLC12A5	Q9H2X9	1139 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	POGK	Q9P215	609 aa		13.83	□□□□□ -0.2
FBXO38-215	ENST00000509411	CPS1	P31327	1500 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	UBAP1L	F5GYI3	381 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	BCAN	Q96GW7	911 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	MRS2	Q9HD23	443 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	EVC2	Q86UK5	1308 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	ROBO2	Q9HCK4	1378 aa		13.82	□□□□□ -0.2
FBXO38-215	ENST00000509411	RALBP1	Q15311	655 aa		13.81	□□□□□ -0.2
FBXO38-215	ENST00000509411	PUS7	Q96PZ0	661 aa	Known RBP	13.81	□□□□□ -0.2
FBXO38-215	ENST00000509411	EID1	Q9Y6B2	187 aa		13.81	□□□□□ -0.2
FBXO38-215	ENST00000509411	KTN1	Q86UP2	1357 aa	Known RBP	13.81	□□□□□ -0.2
FBXO38-215	ENST00000509411	CENPB	P07199	599 aa	Predicted RBP	13.8	□□□□□ -0.2
FBXO38-215	ENST00000509411	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.8	□□□□□ -0.2
FBXO38-215	ENST00000509411	TMC1	Q8TDI8	760 aa		13.79	□□□□□ -0.2
FBXO38-215	ENST00000509411	SIRT1	Q96EB6	747 aa		13.79	□□□□□ -0.2
FBXO38-215	ENST00000509411	CDK19	Q9BWU1	502 aa		13.79	□□□□□ -0.2
FBXO38-215	ENST00000509411	FAM135B	Q49AJ0	1406 aa		13.79	□□□□□ -0.2
FBXO38-215	ENST00000509411	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.78	□□□□□ -0.2
FBXO38-215	ENST00000509411	TBX22	Q9Y458	520 aa		13.78	□□□□□ -0.2
FBXO38-215	ENST00000509411	NPHP4	O75161	1426 aa	Predicted RBP	13.78	□□□□□ -0.2
FBXO38-215	ENST00000509411	CD163L1	Q9NR16	1453 aa		13.78	□□□□□ -0.2
FBXO38-215	ENST00000509411	KNSTRN	Q9Y448	316 aa		13.77	□□□□□ -0.21
FBXO38-215	ENST00000509411	NSD3	Q9BZ95	1437 aa		13.76	□□□□□ -0.21
FBXO38-215	ENST00000509411	NPC1L1	Q9UHC9	1359 aa		13.76	□□□□□ -0.21
FBXO38-215	ENST00000509411	SRPK2	P78362	688 aa	Known RBP	13.76	□□□□□ -0.21
FBXO38-215	ENST00000509411	FAM9B	Q8IZU0	186 aa		13.76	□□□□□ -0.21
FBXO38-215	ENST00000509411	XRN1	Q8IZH2	1706 aa	Known RBP	13.76	□□□□□ -0.21
FBXO38-215	ENST00000509411	DIP2A	Q14689	1571 aa		13.75	□□□□□ -0.21
FBXO38-215	ENST00000509411	BRD4	O60885	1362 aa	Predicted RBP	13.75	□□□□□ -0.21
FBXO38-215	ENST00000509411	TOM1	O60784	492 aa		13.75	□□□□□ -0.21
FBXO38-215	ENST00000509411	PNISR	Q8TF01	805 aa	Known RBP	13.75	□□□□□ -0.21
FBXO38-215	ENST00000509411	AMOTL2	Q9Y2J4	779 aa		13.75	□□□□□ -0.21
FBXO38-215	ENST00000509411	ANKRD36B	Q8N2N9	1353 aa		13.74	□□□□□ -0.21
FBXO38-215	ENST00000509411		A0A1W2PP64	1363 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	ATAD2	Q6PL18	1390 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	USP32	Q8NFA0	1604 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	WASL	O00401	505 aa	Predicted RBP	13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	PPP2R1A	P30153	589 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	ILDR2	Q71H61	639 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	STRCP1	A6NGW2	1772 aa		13.73	□□□□□ -0.21
FBXO38-215	ENST00000509411	PRR36	Q9H6K5	1346 aa		13.72	□□□□□ -0.21
FBXO38-215	ENST00000509411	ADGRB2	O60241	1585 aa		13.72	□□□□□ -0.21
FBXO38-215	ENST00000509411	NLRP13	Q86W25	1043 aa		13.72	□□□□□ -0.21
FBXO38-215	ENST00000509411	CABP1	Q9NZU7	370 aa		13.71	□□□□□ -0.21
FBXO38-215	ENST00000509411	PTCH1	Q13635	1447 aa		13.71	□□□□□ -0.22
FBXO38-215	ENST00000509411	KCNA6	P17658	529 aa		13.7	□□□□□ -0.22
FBXO38-215	ENST00000509411	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
FBXO38-215	ENST00000509411	CHD2	O14647	1828 aa	Known RBP	13.69	□□□□□ -0.22
FBXO38-215	ENST00000509411	PIP4K2B	P78356	416 aa		13.69	□□□□□ -0.22
FBXO38-215	ENST00000509411	NINL	Q9Y2I6	1382 aa		13.69	□□□□□ -0.22
FBXO38-215	ENST00000509411	ATP7B	P35670	1465 aa		13.68	□□□□□ -0.22
FBXO38-215	ENST00000509411	SOCS7	O14512	581 aa		13.68	□□□□□ -0.22
FBXO38-215	ENST00000509411	NUDT16	Q96DE0	195 aa	Known RBP	13.68	□□□□□ -0.22
FBXO38-215	ENST00000509411	PIK3R4	Q99570	1358 aa		13.68	□□□□□ -0.22
FBXO38-215	ENST00000509411	PPIP5K1	Q6PFW1	1433 aa		13.67	□□□□□ -0.22
FBXO38-215	ENST00000509411	SENP3-EIF4A1	A0A087X0R7	540 aa		13.67	□□□□□ -0.22
FBXO38-215	ENST00000509411		U3KPZ7	1027 aa	Predicted RBP	13.67	□□□□□ -0.22
FBXO38-215	ENST00000509411	TOPAZ1	Q8N9V7	1692 aa		13.66	□□□□□ -0.22
FBXO38-215	ENST00000509411	CPSF1	Q10570	1443 aa	Known RBP	13.66	□□□□□ -0.22
FBXO38-215	ENST00000509411	LRRC7	Q96NW7	1537 aa		13.66	□□□□□ -0.22
FBXO38-215	ENST00000509411	HSPA1L	P34931	641 aa		13.66	□□□□□ -0.22
FBXO38-215	ENST00000509411	CDC42BPG	Q6DT37	1551 aa		13.65	□□□□□ -0.22
FBXO38-215	ENST00000509411	XIRP1	Q702N8	1843 aa	Known RBP	13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	AKAP12	Q02952	1782 aa		13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	NKTR	P30414	1462 aa	Known RBP	13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	NUTM2F	A1L443	756 aa		13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	RBM33	Q96EV2	1170 aa	Known RBP	13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	CGNL1	Q0VF96	1302 aa		13.64	□□□□□ -0.23
FBXO38-215	ENST00000509411	FYB1	O15117	783 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms