RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
LYSMD3-204ENST00000509384 FAM135BQ49AJ0 1406 aa17.27■□□□□ 0.36
LYSMD3-204ENST00000509384 PLEKHH1Q9ULM0 1364 aa17.27■□□□□ 0.35
LYSMD3-204ENST00000509384 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
LYSMD3-204ENST00000509384 MYOM1P52179 1685 aa17.26■□□□□ 0.35
LYSMD3-204ENST00000509384 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
LYSMD3-204ENST00000509384 PER1O15534 1290 aaPredicted RBP17.24■□□□□ 0.35
LYSMD3-204ENST00000509384 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
LYSMD3-204ENST00000509384 ROBO2Q9HCK4 1378 aa17.23■□□□□ 0.35
LYSMD3-204ENST00000509384 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
LYSMD3-204ENST00000509384 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
LYSMD3-204ENST00000509384 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
LYSMD3-204ENST00000509384 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
LYSMD3-204ENST00000509384 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
LYSMD3-204ENST00000509384 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
LYSMD3-204ENST00000509384 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
LYSMD3-204ENST00000509384 RALBP1Q15311 655 aa17.19■□□□□ 0.34
LYSMD3-204ENST00000509384 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
LYSMD3-204ENST00000509384 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
LYSMD3-204ENST00000509384 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
LYSMD3-204ENST00000509384 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
LYSMD3-204ENST00000509384 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
LYSMD3-204ENST00000509384 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
LYSMD3-204ENST00000509384 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
LYSMD3-204ENST00000509384 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
LYSMD3-204ENST00000509384 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
LYSMD3-204ENST00000509384 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.34
LYSMD3-204ENST00000509384 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 KCNA6P17658 529 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
LYSMD3-204ENST00000509384 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
LYSMD3-204ENST00000509384 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
LYSMD3-204ENST00000509384 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
LYSMD3-204ENST00000509384 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
LYSMD3-204ENST00000509384 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
LYSMD3-204ENST00000509384 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
LYSMD3-204ENST00000509384 FBXO41Q8TF61 875 aa17.1■□□□□ 0.33
LYSMD3-204ENST00000509384 HSPA2P54652 639 aa17.09■□□□□ 0.33
LYSMD3-204ENST00000509384 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
LYSMD3-204ENST00000509384 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
LYSMD3-204ENST00000509384 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
LYSMD3-204ENST00000509384 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
LYSMD3-204ENST00000509384 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
LYSMD3-204ENST00000509384 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
LYSMD3-204ENST00000509384 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
LYSMD3-204ENST00000509384 ATP7BP35670 1465 aa17.08■□□□□ 0.32
LYSMD3-204ENST00000509384 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
LYSMD3-204ENST00000509384 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
LYSMD3-204ENST00000509384 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
LYSMD3-204ENST00000509384 CHD2O14647 1828 aaKnown RBP17.06■□□□□ 0.32
LYSMD3-204ENST00000509384 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
LYSMD3-204ENST00000509384 NSD2O96028 1365 aa17.05■□□□□ 0.32
LYSMD3-204ENST00000509384 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
LYSMD3-204ENST00000509384 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
LYSMD3-204ENST00000509384 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
LYSMD3-204ENST00000509384 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
LYSMD3-204ENST00000509384 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
LYSMD3-204ENST00000509384 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
LYSMD3-204ENST00000509384 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
LYSMD3-204ENST00000509384 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
LYSMD3-204ENST00000509384 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
LYSMD3-204ENST00000509384 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
LYSMD3-204ENST00000509384 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
LYSMD3-204ENST00000509384 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
LYSMD3-204ENST00000509384 PLEKHG3A1L390 1219 aa16.98■□□□□ 0.31
LYSMD3-204ENST00000509384 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
LYSMD3-204ENST00000509384 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
LYSMD3-204ENST00000509384 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
LYSMD3-204ENST00000509384 NALCNQ8IZF0 1738 aa16.98■□□□□ 0.31
LYSMD3-204ENST00000509384 PROSER2Q86WR7 435 aaPredicted RBP16.97■□□□□ 0.31
LYSMD3-204ENST00000509384 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
LYSMD3-204ENST00000509384 FYB1O15117 783 aa16.96■□□□□ 0.3
LYSMD3-204ENST00000509384 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.3
LYSMD3-204ENST00000509384 GGNBP2Q9H3C7 697 aa16.96■□□□□ 0.3
LYSMD3-204ENST00000509384 ACEP12821 1306 aa16.95■□□□□ 0.3
LYSMD3-204ENST00000509384 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
LYSMD3-204ENST00000509384 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
LYSMD3-204ENST00000509384 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
LYSMD3-204ENST00000509384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
LYSMD3-204ENST00000509384 ITSN1Q15811 1721 aa16.93■□□□□ 0.3
LYSMD3-204ENST00000509384 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
LYSMD3-204ENST00000509384 USP6P35125 1406 aa16.92■□□□□ 0.3
LYSMD3-204ENST00000509384 MON2Q7Z3U7 1717 aa16.92■□□□□ 0.3
LYSMD3-204ENST00000509384 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
LYSMD3-204ENST00000509384 POLR3AO14802 1390 aaPredicted RBP16.92■□□□□ 0.3
LYSMD3-204ENST00000509384 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
LYSMD3-204ENST00000509384 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
LYSMD3-204ENST00000509384 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
LYSMD3-204ENST00000509384 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
LYSMD3-204ENST00000509384 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
LYSMD3-204ENST00000509384 NME9Q86XW9 330 aa16.9■□□□□ 0.3
LYSMD3-204ENST00000509384 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms