RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MYOM2P54296 1465 aa10.74□□□□□ -0.69
TOPBP1-207ENST00000509162 CLCN6P51797 869 aa10.74□□□□□ -0.69
TOPBP1-207ENST00000509162 NALCNQ8IZF0 1738 aa10.73□□□□□ -0.69
TOPBP1-207ENST00000509162 GABBR2O75899 941 aa10.73□□□□□ -0.69
TOPBP1-207ENST00000509162 HRCP23327 699 aa10.73□□□□□ -0.69
TOPBP1-207ENST00000509162 PRAG1Q86YV5 1406 aa10.73□□□□□ -0.69
TOPBP1-207ENST00000509162 MNX1P50219 401 aaPredicted RBP10.72□□□□□ -0.69
TOPBP1-207ENST00000509162 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
TOPBP1-207ENST00000509162 ADGRF5Q8IZF2 1346 aa10.72□□□□□ -0.69
TOPBP1-207ENST00000509162 ADGRB1O14514 1584 aa10.71□□□□□ -0.69
TOPBP1-207ENST00000509162 KNDC1Q76NI1 1749 aa10.71□□□□□ -0.69
TOPBP1-207ENST00000509162 TMEM94Q12767 1356 aa10.7□□□□□ -0.7
TOPBP1-207ENST00000509162 RBM33Q96EV2 1170 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-207ENST00000509162 EID1Q9Y6B2 187 aa10.7□□□□□ -0.7
TOPBP1-207ENST00000509162 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
TOPBP1-207ENST00000509162 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 KCNA6P17658 529 aa10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 ZNF579Q8NAF0 562 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 LAMC1P11047 1609 aa10.68□□□□□ -0.7
TOPBP1-207ENST00000509162 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 ROBO2Q9HCK4 1378 aa10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-207ENST00000509162 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
TOPBP1-207ENST00000509162 TECPR2O15040 1411 aa10.66□□□□□ -0.7
TOPBP1-207ENST00000509162 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
TOPBP1-207ENST00000509162 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
TOPBP1-207ENST00000509162 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
TOPBP1-207ENST00000509162 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
TOPBP1-207ENST00000509162 PLEKHH1Q9ULM0 1364 aa10.64□□□□□ -0.71
TOPBP1-207ENST00000509162 ROBO1Q9Y6N7 1651 aa10.63□□□□□ -0.71
TOPBP1-207ENST00000509162 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
TOPBP1-207ENST00000509162 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-207ENST00000509162 ARHGEF28Q8N1W1 1705 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-207ENST00000509162 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
TOPBP1-207ENST00000509162 LRPPRCP42704 1394 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-207ENST00000509162 KIAA1210Q9ULL0 1709 aa10.61□□□□□ -0.71
TOPBP1-207ENST00000509162 CDC42BPGQ6DT37 1551 aa10.61□□□□□ -0.71
TOPBP1-207ENST00000509162 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-207ENST00000509162 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
TOPBP1-207ENST00000509162 TRPM1Q7Z4N2 1603 aa10.61□□□□□ -0.71
TOPBP1-207ENST00000509162 MST1RQ04912 1400 aa10.6□□□□□ -0.71
TOPBP1-207ENST00000509162 DLC1Q96QB1 1528 aa10.6□□□□□ -0.71
TOPBP1-207ENST00000509162 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
TOPBP1-207ENST00000509162 MIER1Q8N108 512 aa10.6□□□□□ -0.71
TOPBP1-207ENST00000509162 COL16A1Q07092 1604 aaPredicted RBP10.59□□□□□ -0.71
TOPBP1-207ENST00000509162 CFAP70Q5T0N1 1121 aa10.59□□□□□ -0.71
TOPBP1-207ENST00000509162 BCANQ96GW7 911 aa10.59□□□□□ -0.71
TOPBP1-207ENST00000509162 ADGRB2O60241 1585 aa10.59□□□□□ -0.71
TOPBP1-207ENST00000509162 DCCP43146 1447 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 TMEM132EQ6IEE7 984 aa10.58□□□□□ -0.72
TOPBP1-207ENST00000509162 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
TOPBP1-207ENST00000509162 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
TOPBP1-207ENST00000509162 C14orf93Q9H972 538 aaKnown RBP10.57□□□□□ -0.72
TOPBP1-207ENST00000509162 AHDC1Q5TGY3 1603 aaPredicted RBP10.57□□□□□ -0.72
TOPBP1-207ENST00000509162 ABCC11Q96J66 1382 aa10.56□□□□□ -0.72
TOPBP1-207ENST00000509162 MSH6P52701 1360 aa10.55□□□□□ -0.72
TOPBP1-207ENST00000509162 FAM135BQ49AJ0 1406 aa10.55□□□□□ -0.72
TOPBP1-207ENST00000509162 HSPA1LP34931 641 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 PIP4K2BP78356 416 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 PLCD3Q8N3E9 789 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 L3MBTL2Q969R5 705 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 C1orf167Q5SNV9 1468 aa10.54□□□□□ -0.72
TOPBP1-207ENST00000509162 PHLPP1O60346 1717 aa10.53□□□□□ -0.72
TOPBP1-207ENST00000509162 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
TOPBP1-207ENST00000509162 MED1Q15648 1581 aaPredicted RBP10.52□□□□□ -0.72
TOPBP1-207ENST00000509162 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 NBPF8Q3BBV2 869 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 WAPLQ7Z5K2 1190 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 STK26Q9P289 416 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 TOPAZ1Q8N9V7 1692 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
TOPBP1-207ENST00000509162 QRICH2Q9H0J4 1663 aa10.51□□□□□ -0.73
TOPBP1-207ENST00000509162 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
TOPBP1-207ENST00000509162 RGPD8O14715 1765 aaPredicted RBP10.51□□□□□ -0.73
TOPBP1-207ENST00000509162 TOM1O60784 492 aa10.5□□□□□ -0.73
TOPBP1-207ENST00000509162 BRINP3Q76B58 766 aa10.5□□□□□ -0.73
TOPBP1-207ENST00000509162 LRP6O75581 1613 aa10.5□□□□□ -0.73
TOPBP1-207ENST00000509162 GPRASP1Q5JY77 1395 aa10.5□□□□□ -0.73
TOPBP1-207ENST00000509162 NEUROD1Q13562 356 aa10.49□□□□□ -0.73
TOPBP1-207ENST00000509162 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
TOPBP1-207ENST00000509162 SHPRHQ149N8 1683 aa10.49□□□□□ -0.73
TOPBP1-207ENST00000509162 ATP7BP35670 1465 aa10.49□□□□□ -0.73
TOPBP1-207ENST00000509162 PXDNQ92626 1479 aa10.49□□□□□ -0.73
TOPBP1-207ENST00000509162 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
TOPBP1-207ENST00000509162 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms