RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 METP08581 1390 aa22.2■■□□□ 1.14
NFKB1-207ENST00000508584 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
NFKB1-207ENST00000508584 TMEM94Q12767 1356 aa22.19■■□□□ 1.14
NFKB1-207ENST00000508584 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
NFKB1-207ENST00000508584 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
NFKB1-207ENST00000508584 DLC1Q96QB1 1528 aa22.17■■□□□ 1.14
NFKB1-207ENST00000508584 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
NFKB1-207ENST00000508584 PRAM1Q96QH2 718 aa22.15■■□□□ 1.14
NFKB1-207ENST00000508584 POGKQ9P215 609 aa22.15■■□□□ 1.14
NFKB1-207ENST00000508584 TBX22Q9Y458 520 aa22.15■■□□□ 1.14
NFKB1-207ENST00000508584 DIP2AQ14689 1571 aa22.14■■□□□ 1.13
NFKB1-207ENST00000508584 ANP32CO43423 234 aa22.13■■□□□ 1.13
NFKB1-207ENST00000508584 NKTRP30414 1462 aaKnown RBP22.13■■□□□ 1.13
NFKB1-207ENST00000508584 TECPR2O15040 1411 aa22.13■■□□□ 1.13
NFKB1-207ENST00000508584 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
NFKB1-207ENST00000508584 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
NFKB1-207ENST00000508584 XIRP1Q702N8 1843 aaKnown RBP22.12■■□□□ 1.13
NFKB1-207ENST00000508584 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
NFKB1-207ENST00000508584 SAFB2Q14151 953 aaKnown RBP eCLIP22.1■■□□□ 1.13
NFKB1-207ENST00000508584 NWD1Q149M9 1564 aa22.1■■□□□ 1.13
NFKB1-207ENST00000508584 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
NFKB1-207ENST00000508584 KNDC1Q76NI1 1749 aa22.09■■□□□ 1.13
NFKB1-207ENST00000508584 MSH6P52701 1360 aa22.08■■□□□ 1.12
NFKB1-207ENST00000508584 PUS7Q96PZ0 661 aaKnown RBP22.07■■□□□ 1.12
NFKB1-207ENST00000508584 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
NFKB1-207ENST00000508584 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
NFKB1-207ENST00000508584 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
NFKB1-207ENST00000508584 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
NFKB1-207ENST00000508584 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
NFKB1-207ENST00000508584 PIK3R4Q99570 1358 aa22.05■■□□□ 1.12
NFKB1-207ENST00000508584 ROBO2Q9HCK4 1378 aa22.03■■□□□ 1.12
NFKB1-207ENST00000508584 PANK3Q9H999 370 aa22.03■■□□□ 1.12
NFKB1-207ENST00000508584 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
NFKB1-207ENST00000508584 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
NFKB1-207ENST00000508584 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
NFKB1-207ENST00000508584 PTCH1Q13635 1447 aa22■■□□□ 1.11
NFKB1-207ENST00000508584 MYOM1P52179 1685 aa22■■□□□ 1.11
NFKB1-207ENST00000508584 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
NFKB1-207ENST00000508584 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
NFKB1-207ENST00000508584 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
NFKB1-207ENST00000508584 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
NFKB1-207ENST00000508584 SRPK2P78362 688 aaKnown RBP21.98■■□□□ 1.11
NFKB1-207ENST00000508584 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
NFKB1-207ENST00000508584 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
NFKB1-207ENST00000508584 PER1O15534 1290 aaPredicted RBP21.97■■□□□ 1.11
NFKB1-207ENST00000508584 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
NFKB1-207ENST00000508584 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
NFKB1-207ENST00000508584 ATAD2Q6PL18 1390 aa21.96■■□□□ 1.11
NFKB1-207ENST00000508584 TMC1Q8TDI8 760 aa21.95■■□□□ 1.1
NFKB1-207ENST00000508584 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
NFKB1-207ENST00000508584 NINLQ9Y2I6 1382 aa21.94■■□□□ 1.1
NFKB1-207ENST00000508584 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
NFKB1-207ENST00000508584 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
NFKB1-207ENST00000508584 SLC12A5Q9H2X9 1139 aa21.92■■□□□ 1.1
NFKB1-207ENST00000508584 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
NFKB1-207ENST00000508584 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
NFKB1-207ENST00000508584 ATF3P18847 181 aa21.91■■□□□ 1.1
NFKB1-207ENST00000508584 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
NFKB1-207ENST00000508584 KTN1Q86UP2 1357 aaKnown RBP21.9■■□□□ 1.1
NFKB1-207ENST00000508584 CNGB1Q14028 1251 aaPredicted RBP21.9■■□□□ 1.1
NFKB1-207ENST00000508584 JCADQ9P266 1359 aa21.89■■□□□ 1.1
NFKB1-207ENST00000508584 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.09
NFKB1-207ENST00000508584 RALBP1Q15311 655 aa21.88■■□□□ 1.09
NFKB1-207ENST00000508584 ANKRD36BQ8N2N9 1353 aa21.87■■□□□ 1.09
NFKB1-207ENST00000508584 PHLPP1O60346 1717 aa21.87■■□□□ 1.09
NFKB1-207ENST00000508584 CARD14Q9BXL6 1004 aa21.87■■□□□ 1.09
NFKB1-207ENST00000508584 AMER1Q5JTC6 1135 aaPredicted RBP21.85■■□□□ 1.09
NFKB1-207ENST00000508584 PARD3Q8TEW0 1356 aa21.85■■□□□ 1.09
NFKB1-207ENST00000508584 NPC1L1Q9UHC9 1359 aa21.85■■□□□ 1.09
NFKB1-207ENST00000508584 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
NFKB1-207ENST00000508584 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
NFKB1-207ENST00000508584 NSD3Q9BZ95 1437 aa21.83■■□□□ 1.09
NFKB1-207ENST00000508584 POTEAQ6S8J7 498 aa21.83■■□□□ 1.09
NFKB1-207ENST00000508584 TERF2IPQ9NYB0 399 aa21.83■■□□□ 1.09
NFKB1-207ENST00000508584 CABP1Q9NZU7 370 aa21.82■■□□□ 1.08
NFKB1-207ENST00000508584 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
NFKB1-207ENST00000508584 COL16A1Q07092 1604 aaPredicted RBP21.8■■□□□ 1.08
NFKB1-207ENST00000508584 ATP7BP35670 1465 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 HDGFL2Q7Z4V5 671 aaPredicted RBP21.8■■□□□ 1.08
NFKB1-207ENST00000508584 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 DCCP43146 1447 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
NFKB1-207ENST00000508584 CD163L1Q9NR16 1453 aa21.79■■□□□ 1.08
NFKB1-207ENST00000508584 BRINP3Q76B58 766 aa21.78■■□□□ 1.08
NFKB1-207ENST00000508584 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.08
NFKB1-207ENST00000508584 MRS2Q9HD23 443 aa21.77■■□□□ 1.08
NFKB1-207ENST00000508584 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
NFKB1-207ENST00000508584 CCDC184Q52MB2 194 aa21.76■■□□□ 1.07
NFKB1-207ENST00000508584 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
NFKB1-207ENST00000508584 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
NFKB1-207ENST00000508584 ADGRL3Q9HAR2 1447 aa21.76■■□□□ 1.07
NFKB1-207ENST00000508584 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
NFKB1-207ENST00000508584 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
NFKB1-207ENST00000508584 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
NFKB1-207ENST00000508584 CPSF1Q10570 1443 aaKnown RBP21.73■■□□□ 1.07
NFKB1-207ENST00000508584 NLRP13Q86W25 1043 aa21.73■■□□□ 1.07
NFKB1-207ENST00000508584 BRD4O60885 1362 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms