RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
USP46-207ENST00000508499 ROCK2O75116 1388 aaKnown RBP12.3□□□□□ -0.44
USP46-207ENST00000508499 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
USP46-207ENST00000508499 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
USP46-207ENST00000508499 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
USP46-207ENST00000508499 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
USP46-207ENST00000508499 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
USP46-207ENST00000508499 METP08581 1390 aa12.3□□□□□ -0.44
USP46-207ENST00000508499 STRCP1A6NGW2 1772 aa12.29□□□□□ -0.44
USP46-207ENST00000508499 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
USP46-207ENST00000508499 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
USP46-207ENST00000508499 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
USP46-207ENST00000508499 PTPRUQ92729 1446 aa12.27□□□□□ -0.44
USP46-207ENST00000508499 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
USP46-207ENST00000508499 EIF3AQ14152 1382 aaKnown RBP12.26□□□□□ -0.45
USP46-207ENST00000508499 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
USP46-207ENST00000508499 ADGRB2O60241 1585 aa12.26□□□□□ -0.45
USP46-207ENST00000508499 QRICH2Q9H0J4 1663 aa12.25□□□□□ -0.45
USP46-207ENST00000508499 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
USP46-207ENST00000508499 KCNA6P17658 529 aa12.25□□□□□ -0.45
USP46-207ENST00000508499 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
USP46-207ENST00000508499 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
USP46-207ENST00000508499 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
USP46-207ENST00000508499 USP47Q96K76 1375 aa12.24□□□□□ -0.45
USP46-207ENST00000508499 TMEM132EQ6IEE7 984 aa12.23□□□□□ -0.45
USP46-207ENST00000508499 BCANQ96GW7 911 aa12.23□□□□□ -0.45
USP46-207ENST00000508499 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
USP46-207ENST00000508499 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.45
USP46-207ENST00000508499 NALCNQ8IZF0 1738 aa12.21□□□□□ -0.46
USP46-207ENST00000508499 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.21□□□□□ -0.46
USP46-207ENST00000508499 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
USP46-207ENST00000508499 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP46-207ENST00000508499 CDC42BPGQ6DT37 1551 aa12.2□□□□□ -0.46
USP46-207ENST00000508499 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
USP46-207ENST00000508499 LRRC7Q96NW7 1537 aa12.19□□□□□ -0.46
USP46-207ENST00000508499 DCCP43146 1447 aa12.18□□□□□ -0.46
USP46-207ENST00000508499 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
USP46-207ENST00000508499 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
USP46-207ENST00000508499 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
USP46-207ENST00000508499 TESK2Q96S53 571 aa12.17□□□□□ -0.46
USP46-207ENST00000508499 ADGRL3Q9HAR2 1447 aa12.17□□□□□ -0.46
USP46-207ENST00000508499 FMN2Q9NZ56 1722 aa12.16□□□□□ -0.46
USP46-207ENST00000508499 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
USP46-207ENST00000508499 ITSN1Q15811 1721 aa12.16□□□□□ -0.46
USP46-207ENST00000508499 PRAM1Q96QH2 718 aa12.15□□□□□ -0.46
USP46-207ENST00000508499 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
USP46-207ENST00000508499 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
USP46-207ENST00000508499 HSPA5P11021 654 aaKnown RBP12.14□□□□□ -0.47
USP46-207ENST00000508499 STK26Q9P289 416 aa12.14□□□□□ -0.47
USP46-207ENST00000508499 PLEKHH1Q9ULM0 1364 aa12.14□□□□□ -0.47
USP46-207ENST00000508499 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
USP46-207ENST00000508499 EVX2Q03828 476 aa12.12□□□□□ -0.47
USP46-207ENST00000508499 POGKQ9P215 609 aa12.12□□□□□ -0.47
USP46-207ENST00000508499 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
USP46-207ENST00000508499 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
USP46-207ENST00000508499 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
USP46-207ENST00000508499 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
USP46-207ENST00000508499 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
USP46-207ENST00000508499 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
USP46-207ENST00000508499 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
USP46-207ENST00000508499 MYOM1P52179 1685 aa12.11□□□□□ -0.47
USP46-207ENST00000508499 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
USP46-207ENST00000508499 TMF1P82094 1093 aa12.1□□□□□ -0.47
USP46-207ENST00000508499 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
USP46-207ENST00000508499 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
USP46-207ENST00000508499 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
USP46-207ENST00000508499 ATP7BP35670 1465 aa12.09□□□□□ -0.47
USP46-207ENST00000508499 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
USP46-207ENST00000508499 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
USP46-207ENST00000508499 MSH6P52701 1360 aa12.08□□□□□ -0.48
USP46-207ENST00000508499 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
USP46-207ENST00000508499 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
USP46-207ENST00000508499 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
USP46-207ENST00000508499 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
USP46-207ENST00000508499 MST1RQ04912 1400 aa12.06□□□□□ -0.48
USP46-207ENST00000508499 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
USP46-207ENST00000508499 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
USP46-207ENST00000508499 CDK19Q9BWU1 502 aa12.04□□□□□ -0.48
USP46-207ENST00000508499 MON2Q7Z3U7 1717 aa12.04□□□□□ -0.48
USP46-207ENST00000508499 KIF7Q2M1P5 1343 aa12.04□□□□□ -0.48
USP46-207ENST00000508499 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
USP46-207ENST00000508499 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
USP46-207ENST00000508499 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
USP46-207ENST00000508499 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
USP46-207ENST00000508499 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP46-207ENST00000508499 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
USP46-207ENST00000508499 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
USP46-207ENST00000508499 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
USP46-207ENST00000508499 NHSL1Q5SYE7 1610 aa12.02□□□□□ -0.49
USP46-207ENST00000508499 ATF3P18847 181 aa12.02□□□□□ -0.49
USP46-207ENST00000508499 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
USP46-207ENST00000508499 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
USP46-207ENST00000508499 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
USP46-207ENST00000508499 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
USP46-207ENST00000508499 CPSF1Q10570 1443 aaKnown RBP12.01□□□□□ -0.49
USP46-207ENST00000508499 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
USP46-207ENST00000508499 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
USP46-207ENST00000508499 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
USP46-207ENST00000508499 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
USP46-207ENST00000508499 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms