RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 KDM4AO75164 1064 aa9.91□□□□□ -0.82
CLOCK-207ENST00000508049 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
CLOCK-207ENST00000508049 MINK1Q8N4C8 1332 aaPredicted RBP9.9□□□□□ -0.82
CLOCK-207ENST00000508049 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
CLOCK-207ENST00000508049 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
CLOCK-207ENST00000508049 MMP16P51512 607 aa9.87□□□□□ -0.83
CLOCK-207ENST00000508049 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
CLOCK-207ENST00000508049 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
CLOCK-207ENST00000508049 USP46P62068 366 aa9.86□□□□□ -0.83
CLOCK-207ENST00000508049 HLA-CQ95604 372 aa9.86□□□□□ -0.83
CLOCK-207ENST00000508049 AXIN1O15169 862 aa9.84□□□□□ -0.83
CLOCK-207ENST00000508049 AVPP01185 164 aa9.84□□□□□ -0.83
CLOCK-207ENST00000508049 TRIM32Q13049 653 aa9.84□□□□□ -0.83
CLOCK-207ENST00000508049 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
CLOCK-207ENST00000508049 HOXA2O43364 376 aa9.83□□□□□ -0.84
CLOCK-207ENST00000508049 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
CLOCK-207ENST00000508049 CLCN1P35523 988 aa9.83□□□□□ -0.84
CLOCK-207ENST00000508049 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
CLOCK-207ENST00000508049 KRI1Q8N9T8 703 aaKnown RBP9.83□□□□□ -0.84
CLOCK-207ENST00000508049 GPCPD1Q9NPB8 672 aa9.83□□□□□ -0.84
CLOCK-207ENST00000508049 DACH1Q9UI36 760 aa9.83□□□□□ -0.84
CLOCK-207ENST00000508049 WNT7AO00755 349 aa9.82□□□□□ -0.84
CLOCK-207ENST00000508049 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
CLOCK-207ENST00000508049 CTC1Q2NKJ3 1217 aa9.81□□□□□ -0.84
CLOCK-207ENST00000508049 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
CLOCK-207ENST00000508049 FAM217BQ9NTX9 383 aaPredicted RBP9.81□□□□□ -0.84
CLOCK-207ENST00000508049 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
CLOCK-207ENST00000508049 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
CLOCK-207ENST00000508049 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
CLOCK-207ENST00000508049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLOCK-207ENST00000508049 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
CLOCK-207ENST00000508049 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
CLOCK-207ENST00000508049 SMPD1P17405 629 aa9.77□□□□□ -0.85
CLOCK-207ENST00000508049 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
CLOCK-207ENST00000508049 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
CLOCK-207ENST00000508049 J3QL48 77 aa9.75□□□□□ -0.85
CLOCK-207ENST00000508049 JUNDP17535 347 aa9.75□□□□□ -0.85
CLOCK-207ENST00000508049 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
CLOCK-207ENST00000508049 SKOR1P84550 965 aa9.74□□□□□ -0.85
CLOCK-207ENST00000508049 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
CLOCK-207ENST00000508049 FDX1P10109 184 aa9.73□□□□□ -0.85
CLOCK-207ENST00000508049 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
CLOCK-207ENST00000508049 C6orf229H3BNL8 230 aa9.72□□□□□ -0.85
CLOCK-207ENST00000508049 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
CLOCK-207ENST00000508049 WNT7BP56706 349 aa9.72□□□□□ -0.85
CLOCK-207ENST00000508049 HPS1Q92902 700 aa9.71□□□□□ -0.86
CLOCK-207ENST00000508049 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
CLOCK-207ENST00000508049 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
CLOCK-207ENST00000508049 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
CLOCK-207ENST00000508049 ATP13A2Q9NQ11 1180 aa9.7□□□□□ -0.86
CLOCK-207ENST00000508049 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
CLOCK-207ENST00000508049 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
CLOCK-207ENST00000508049 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
CLOCK-207ENST00000508049 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
CLOCK-207ENST00000508049 MS4A1P11836 297 aa9.67□□□□□ -0.86
CLOCK-207ENST00000508049 NDUFV2P19404 249 aa9.67□□□□□ -0.86
CLOCK-207ENST00000508049 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
CLOCK-207ENST00000508049 ZMYND10O75800 440 aa9.66□□□□□ -0.86
CLOCK-207ENST00000508049 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
CLOCK-207ENST00000508049 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
CLOCK-207ENST00000508049 WFS1O76024 890 aa9.65□□□□□ -0.86
CLOCK-207ENST00000508049 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
CLOCK-207ENST00000508049 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
CLOCK-207ENST00000508049 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
CLOCK-207ENST00000508049 AMHR2Q16671 573 aa9.64□□□□□ -0.87
CLOCK-207ENST00000508049 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
CLOCK-207ENST00000508049 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
CLOCK-207ENST00000508049 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
CLOCK-207ENST00000508049 SIAH2O43255 324 aa9.62□□□□□ -0.87
CLOCK-207ENST00000508049 SH3BP2P78314 561 aa9.62□□□□□ -0.87
CLOCK-207ENST00000508049 PTPRNQ16849 979 aa9.62□□□□□ -0.87
CLOCK-207ENST00000508049 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
CLOCK-207ENST00000508049 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
CLOCK-207ENST00000508049 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
CLOCK-207ENST00000508049 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
CLOCK-207ENST00000508049 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
CLOCK-207ENST00000508049 WASF2Q9Y6W5 498 aa9.61□□□□□ -0.87
CLOCK-207ENST00000508049 MTMR2Q13614 643 aa9.6□□□□□ -0.87
CLOCK-207ENST00000508049 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
CLOCK-207ENST00000508049 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
CLOCK-207ENST00000508049 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
CLOCK-207ENST00000508049 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
CLOCK-207ENST00000508049 BAP1Q92560 729 aa9.59□□□□□ -0.87
CLOCK-207ENST00000508049 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
CLOCK-207ENST00000508049 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
CLOCK-207ENST00000508049 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
CLOCK-207ENST00000508049 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
CLOCK-207ENST00000508049 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
CLOCK-207ENST00000508049 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
CLOCK-207ENST00000508049 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
CLOCK-207ENST00000508049 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
CLOCK-207ENST00000508049 BMP1P13497 986 aa9.54□□□□□ -0.88
CLOCK-207ENST00000508049 CTHP32929 405 aa9.54□□□□□ -0.88
CLOCK-207ENST00000508049 GJA5P36382 358 aa9.54□□□□□ -0.88
CLOCK-207ENST00000508049 PCDHB15Q9Y5E8 787 aa9.54□□□□□ -0.88
CLOCK-207ENST00000508049 TLL2Q9Y6L7 1015 aa9.54□□□□□ -0.88
CLOCK-207ENST00000508049 TRIM66O15016 1216 aa9.53□□□□□ -0.88
CLOCK-207ENST00000508049 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
CLOCK-207ENST00000508049 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
CLOCK-207ENST00000508049 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms