RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
PDGFRA-205ENST00000507536 JCADQ9P266 1359 aa15.87■□□□□ 0.13
PDGFRA-205ENST00000507536 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
PDGFRA-205ENST00000507536 DCCP43146 1447 aa15.84■□□□□ 0.13
PDGFRA-205ENST00000507536 ASXL1Q8IXJ9 1541 aa15.84■□□□□ 0.13
PDGFRA-205ENST00000507536 PPLO60437 1756 aa15.83■□□□□ 0.12
PDGFRA-205ENST00000507536 ITGAEP38570 1179 aa15.83■□□□□ 0.12
PDGFRA-205ENST00000507536 RRBP1Q9P2E9 1410 aaKnown RBP15.83■□□□□ 0.12
PDGFRA-205ENST00000507536 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
PDGFRA-205ENST00000507536 METP08581 1390 aa15.81■□□□□ 0.12
PDGFRA-205ENST00000507536 LAMC1P11047 1609 aa15.81■□□□□ 0.12
PDGFRA-205ENST00000507536 C19orf44Q9H6X5 657 aa15.81■□□□□ 0.12
PDGFRA-205ENST00000507536 MST1RQ04912 1400 aa15.8■□□□□ 0.12
PDGFRA-205ENST00000507536 NAIPQ13075 1403 aa15.8■□□□□ 0.12
PDGFRA-205ENST00000507536 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
PDGFRA-205ENST00000507536 AMOTL2Q9Y2J4 779 aa15.8■□□□□ 0.12
PDGFRA-205ENST00000507536 CADPS2Q86UW7 1296 aa15.79■□□□□ 0.12
PDGFRA-205ENST00000507536 BRINP3Q76B58 766 aa15.78■□□□□ 0.12
PDGFRA-205ENST00000507536 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
PDGFRA-205ENST00000507536 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
PDGFRA-205ENST00000507536 SPATA31A6Q5VVP1 1343 aa15.77■□□□□ 0.12
PDGFRA-205ENST00000507536 HAX1O00165 279 aa15.77■□□□□ 0.12
PDGFRA-205ENST00000507536 IFT172Q9UG01 1749 aa15.77■□□□□ 0.11
PDGFRA-205ENST00000507536 ATF3P18847 181 aa15.76■□□□□ 0.11
PDGFRA-205ENST00000507536 SETD5Q9C0A6 1442 aa15.75■□□□□ 0.11
PDGFRA-205ENST00000507536 PRAG1Q86YV5 1406 aa15.73■□□□□ 0.11
PDGFRA-205ENST00000507536 PTCH1Q13635 1447 aa15.72■□□□□ 0.11
PDGFRA-205ENST00000507536 EP400Q96L91 3159 aa15.71■□□□□ 0.11
PDGFRA-205ENST00000507536 HFM1A2PYH4 1435 aa15.71■□□□□ 0.11
PDGFRA-205ENST00000507536 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
PDGFRA-205ENST00000507536 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
PDGFRA-205ENST00000507536 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
PDGFRA-205ENST00000507536 EVX2Q03828 476 aa15.69■□□□□ 0.1
PDGFRA-205ENST00000507536 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
PDGFRA-205ENST00000507536 C1orf167Q5SNV9 1468 aa15.68■□□□□ 0.1
PDGFRA-205ENST00000507536 ROBO2Q9HCK4 1378 aa15.68■□□□□ 0.1
PDGFRA-205ENST00000507536 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
PDGFRA-205ENST00000507536 CDK12Q9NYV4 1490 aaPredicted RBP15.67■□□□□ 0.1
PDGFRA-205ENST00000507536 PNPLA6Q8IY17 1366 aa15.67■□□□□ 0.1
PDGFRA-205ENST00000507536 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
PDGFRA-205ENST00000507536 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
PDGFRA-205ENST00000507536 MEX3CQ5U5Q3 659 aaKnown RBP15.66■□□□□ 0.1
PDGFRA-205ENST00000507536 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
PDGFRA-205ENST00000507536 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
PDGFRA-205ENST00000507536 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
PDGFRA-205ENST00000507536 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
PDGFRA-205ENST00000507536 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
PDGFRA-205ENST00000507536 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
PDGFRA-205ENST00000507536 AFF2P51816 1311 aa15.63■□□□□ 0.09
PDGFRA-205ENST00000507536 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
PDGFRA-205ENST00000507536 SP7Q8TDD2 431 aaPredicted RBP15.62■□□□□ 0.09
PDGFRA-205ENST00000507536 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
PDGFRA-205ENST00000507536 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
PDGFRA-205ENST00000507536 RGS12O14924 1447 aa15.61■□□□□ 0.09
PDGFRA-205ENST00000507536 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
PDGFRA-205ENST00000507536 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
PDGFRA-205ENST00000507536 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
PDGFRA-205ENST00000507536 PXDNQ92626 1479 aa15.59■□□□□ 0.09
PDGFRA-205ENST00000507536 VGFO15240 615 aaPredicted RBP15.59■□□□□ 0.09
PDGFRA-205ENST00000507536 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
PDGFRA-205ENST00000507536 SOS2Q07890 1332 aaPredicted RBP15.59■□□□□ 0.09
PDGFRA-205ENST00000507536 RPGRIP1LQ68CZ1 1315 aa15.59■□□□□ 0.09
PDGFRA-205ENST00000507536 RXRBP28702 533 aa15.58■□□□□ 0.08
PDGFRA-205ENST00000507536 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
PDGFRA-205ENST00000507536 TECPR2O15040 1411 aa15.58■□□□□ 0.08
PDGFRA-205ENST00000507536 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.57■□□□□ 0.08
PDGFRA-205ENST00000507536 C8orf37Q96NL8 207 aa15.56■□□□□ 0.08
PDGFRA-205ENST00000507536 MYOM2P54296 1465 aa15.56■□□□□ 0.08
PDGFRA-205ENST00000507536 KIF1AQ12756 1690 aa15.55■□□□□ 0.08
PDGFRA-205ENST00000507536 ADGRF5Q8IZF2 1346 aa15.55■□□□□ 0.08
PDGFRA-205ENST00000507536 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
PDGFRA-205ENST00000507536 PIK3C2GO75747 1445 aa15.54■□□□□ 0.08
PDGFRA-205ENST00000507536 CCDC144AA2RUR9 1427 aa15.53■□□□□ 0.08
PDGFRA-205ENST00000507536 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
PDGFRA-205ENST00000507536 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
PDGFRA-205ENST00000507536 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
PDGFRA-205ENST00000507536 QTRT2Q9H974 415 aaKnown RBP15.51■□□□□ 0.07
PDGFRA-205ENST00000507536 BRWD3Q6RI45 1802 aa15.51■□□□□ 0.07
PDGFRA-205ENST00000507536 ATRNO75882 1429 aa15.51■□□□□ 0.07
PDGFRA-205ENST00000507536 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
PDGFRA-205ENST00000507536 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
PDGFRA-205ENST00000507536 MIER1Q8N108 512 aa15.5■□□□□ 0.07
PDGFRA-205ENST00000507536 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
PDGFRA-205ENST00000507536 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
PDGFRA-205ENST00000507536 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
PDGFRA-205ENST00000507536 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
PDGFRA-205ENST00000507536 ABCC11Q96J66 1382 aa15.48■□□□□ 0.07
PDGFRA-205ENST00000507536 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
PDGFRA-205ENST00000507536 NPHP3Q7Z494 1330 aa15.47■□□□□ 0.07
PDGFRA-205ENST00000507536 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
PDGFRA-205ENST00000507536 FNBP4Q8N3X1 1017 aaPredicted RBP15.47■□□□□ 0.07
PDGFRA-205ENST00000507536 NGLY1Q96IV0 654 aa15.47■□□□□ 0.07
PDGFRA-205ENST00000507536 YTHDC2Q9H6S0 1430 aaKnown RBP15.47■□□□□ 0.07
PDGFRA-205ENST00000507536 GLI3P10071 1580 aa15.46■□□□□ 0.07
PDGFRA-205ENST00000507536 RGL3Q3MIN7 710 aa15.46■□□□□ 0.07
PDGFRA-205ENST00000507536 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
PDGFRA-205ENST00000507536 ESCO1Q5FWF5 840 aa15.45■□□□□ 0.06
PDGFRA-205ENST00000507536 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
PDGFRA-205ENST00000507536 TRPM3Q9HCF6 1732 aaPredicted RBP15.45■□□□□ 0.06
PDGFRA-205ENST00000507536 NWD2Q9ULI1 1742 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms