RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 FAM135BQ49AJ0 1406 aa13.97□□□□□ -0.17
RPS3A-206ENST00000507485 SLC52A1Q9NWF4 448 aa13.97□□□□□ -0.17
RPS3A-206ENST00000507485 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
RPS3A-206ENST00000507485 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.17
RPS3A-206ENST00000507485 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.18
RPS3A-206ENST00000507485 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
RPS3A-206ENST00000507485 PROSER2Q86WR7 435 aaPredicted RBP13.95□□□□□ -0.18
RPS3A-206ENST00000507485 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
RPS3A-206ENST00000507485 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
RPS3A-206ENST00000507485 MAP3K13O43283 966 aa13.93□□□□□ -0.18
RPS3A-206ENST00000507485 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
RPS3A-206ENST00000507485 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
RPS3A-206ENST00000507485 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
RPS3A-206ENST00000507485 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
RPS3A-206ENST00000507485 PPARGC1BQ86YN6 1023 aaKnown RBP13.91□□□□□ -0.18
RPS3A-206ENST00000507485 FAM163AQ96GL9 167 aaPredicted RBP13.91□□□□□ -0.18
RPS3A-206ENST00000507485 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
RPS3A-206ENST00000507485 BCANQ96GW7 911 aa13.9□□□□□ -0.18
RPS3A-206ENST00000507485 LCE2DQ5TA82 110 aaPredicted RBP13.9□□□□□ -0.19
RPS3A-206ENST00000507485 TRPC6Q9Y210 931 aa13.9□□□□□ -0.19
RPS3A-206ENST00000507485 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
RPS3A-206ENST00000507485 POTEAQ6S8J7 498 aa13.88□□□□□ -0.19
RPS3A-206ENST00000507485 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
RPS3A-206ENST00000507485 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
RPS3A-206ENST00000507485 MSH6P52701 1360 aa13.88□□□□□ -0.19
RPS3A-206ENST00000507485 PHLPP1O60346 1717 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
RPS3A-206ENST00000507485 ITGAEP38570 1179 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 NUP155O75694 1391 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
RPS3A-206ENST00000507485 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
RPS3A-206ENST00000507485 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
RPS3A-206ENST00000507485 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
RPS3A-206ENST00000507485 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.85□□□□□ -0.19
RPS3A-206ENST00000507485 DIP2AQ14689 1571 aa13.84□□□□□ -0.19
RPS3A-206ENST00000507485 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
RPS3A-206ENST00000507485 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
RPS3A-206ENST00000507485 SEC24BO95487 1268 aa13.83□□□□□ -0.2
RPS3A-206ENST00000507485 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPS3A-206ENST00000507485 LRP6O75581 1613 aa13.82□□□□□ -0.2
RPS3A-206ENST00000507485 IER5LQ5T953 404 aa13.82□□□□□ -0.2
RPS3A-206ENST00000507485 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
RPS3A-206ENST00000507485 TRPM2O94759 1503 aa13.81□□□□□ -0.2
RPS3A-206ENST00000507485 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
RPS3A-206ENST00000507485 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
RPS3A-206ENST00000507485 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
RPS3A-206ENST00000507485 SETD1AO15047 1707 aaKnown RBP13.8□□□□□ -0.2
RPS3A-206ENST00000507485 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
RPS3A-206ENST00000507485 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
RPS3A-206ENST00000507485 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
RPS3A-206ENST00000507485 JCADQ9P266 1359 aa13.79□□□□□ -0.2
RPS3A-206ENST00000507485 AHDC1Q5TGY3 1603 aaPredicted RBP13.79□□□□□ -0.2
RPS3A-206ENST00000507485 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
RPS3A-206ENST00000507485 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
RPS3A-206ENST00000507485 METP08581 1390 aa13.78□□□□□ -0.2
RPS3A-206ENST00000507485 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
RPS3A-206ENST00000507485 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
RPS3A-206ENST00000507485 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.21
RPS3A-206ENST00000507485 NAIPQ13075 1403 aa13.76□□□□□ -0.21
RPS3A-206ENST00000507485 RRBP1Q9P2E9 1410 aaKnown RBP13.76□□□□□ -0.21
RPS3A-206ENST00000507485 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
RPS3A-206ENST00000507485 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
RPS3A-206ENST00000507485 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
RPS3A-206ENST00000507485 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
RPS3A-206ENST00000507485 MST1RQ04912 1400 aa13.74□□□□□ -0.21
RPS3A-206ENST00000507485 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
RPS3A-206ENST00000507485 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
RPS3A-206ENST00000507485 ATF3P18847 181 aa13.73□□□□□ -0.21
RPS3A-206ENST00000507485 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
RPS3A-206ENST00000507485 DCCP43146 1447 aa13.72□□□□□ -0.21
RPS3A-206ENST00000507485 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
RPS3A-206ENST00000507485 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.21
RPS3A-206ENST00000507485 NUBP1P53384 320 aa13.7□□□□□ -0.22
RPS3A-206ENST00000507485 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
RPS3A-206ENST00000507485 KIF1BO60333 1816 aa13.7□□□□□ -0.22
RPS3A-206ENST00000507485 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
RPS3A-206ENST00000507485 ADGRL3Q9HAR2 1447 aa13.69□□□□□ -0.22
RPS3A-206ENST00000507485 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
RPS3A-206ENST00000507485 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
RPS3A-206ENST00000507485 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
RPS3A-206ENST00000507485 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
RPS3A-206ENST00000507485 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
RPS3A-206ENST00000507485 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
RPS3A-206ENST00000507485 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
RPS3A-206ENST00000507485 PPLO60437 1756 aa13.65□□□□□ -0.22
RPS3A-206ENST00000507485 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
RPS3A-206ENST00000507485 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
RPS3A-206ENST00000507485 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
RPS3A-206ENST00000507485 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
RPS3A-206ENST00000507485 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
RPS3A-206ENST00000507485 ZNF772Q68DY9 489 aaPredicted RBP13.63□□□□□ -0.23
RPS3A-206ENST00000507485 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
RPS3A-206ENST00000507485 LAMC1P11047 1609 aa13.62□□□□□ -0.23
RPS3A-206ENST00000507485 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
RPS3A-206ENST00000507485 AFF2P51816 1311 aa13.62□□□□□ -0.23
RPS3A-206ENST00000507485 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
RPS3A-206ENST00000507485 SLAIN1Q8ND83 568 aa13.62□□□□□ -0.23
RPS3A-206ENST00000507485 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms