RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 NEO1Q92859 1461 aa16.99■□□□□ 0.31
SPDL1-206ENST00000507232 NBR1Q14596 966 aa16.98■□□□□ 0.31
SPDL1-206ENST00000507232 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
SPDL1-206ENST00000507232 MTHFSP49914 203 aa16.97■□□□□ 0.31
SPDL1-206ENST00000507232 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
SPDL1-206ENST00000507232 MYO5BQ9ULV0 1848 aa16.96■□□□□ 0.31
SPDL1-206ENST00000507232 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
SPDL1-206ENST00000507232 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.3
SPDL1-206ENST00000507232 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
SPDL1-206ENST00000507232 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
SPDL1-206ENST00000507232 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
SPDL1-206ENST00000507232 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
SPDL1-206ENST00000507232 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
SPDL1-206ENST00000507232 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
SPDL1-206ENST00000507232 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
SPDL1-206ENST00000507232 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
SPDL1-206ENST00000507232 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SPDL1-206ENST00000507232 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
SPDL1-206ENST00000507232 E9PSI1 815 aa16.93■□□□□ 0.3
SPDL1-206ENST00000507232 BACH2Q9BYV9 841 aa16.93■□□□□ 0.3
SPDL1-206ENST00000507232 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
SPDL1-206ENST00000507232 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
SPDL1-206ENST00000507232 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
SPDL1-206ENST00000507232 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
SPDL1-206ENST00000507232 MLECQ14165 292 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
SPDL1-206ENST00000507232 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
SPDL1-206ENST00000507232 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
SPDL1-206ENST00000507232 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
SPDL1-206ENST00000507232 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
SPDL1-206ENST00000507232 RGS3P49796 1198 aa16.89■□□□□ 0.29
SPDL1-206ENST00000507232 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
SPDL1-206ENST00000507232 POGKQ9P215 609 aa16.89■□□□□ 0.29
SPDL1-206ENST00000507232 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
SPDL1-206ENST00000507232 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
SPDL1-206ENST00000507232 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
SPDL1-206ENST00000507232 MS4A1P11836 297 aa16.88■□□□□ 0.29
SPDL1-206ENST00000507232 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
SPDL1-206ENST00000507232 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
SPDL1-206ENST00000507232 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
SPDL1-206ENST00000507232 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
SPDL1-206ENST00000507232 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
SPDL1-206ENST00000507232 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
SPDL1-206ENST00000507232 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
SPDL1-206ENST00000507232 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
SPDL1-206ENST00000507232 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
SPDL1-206ENST00000507232 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
SPDL1-206ENST00000507232 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
SPDL1-206ENST00000507232 IGHDP01880 384 aa16.83■□□□□ 0.28
SPDL1-206ENST00000507232 FBLN1P23142 703 aa16.83■□□□□ 0.28
SPDL1-206ENST00000507232 WAPLQ7Z5K2 1190 aa16.82■□□□□ 0.28
SPDL1-206ENST00000507232 PTPRMP28827 1452 aa16.82■□□□□ 0.28
SPDL1-206ENST00000507232 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
SPDL1-206ENST00000507232 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
SPDL1-206ENST00000507232 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
SPDL1-206ENST00000507232 CDK19Q9BWU1 502 aa16.81■□□□□ 0.28
SPDL1-206ENST00000507232 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
SPDL1-206ENST00000507232 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
SPDL1-206ENST00000507232 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
SPDL1-206ENST00000507232 CABP1Q9NZU7 370 aa16.8■□□□□ 0.28
SPDL1-206ENST00000507232 FYB1O15117 783 aa16.79■□□□□ 0.28
SPDL1-206ENST00000507232 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
SPDL1-206ENST00000507232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPDL1-206ENST00000507232 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
SPDL1-206ENST00000507232 RLBP1P12271 317 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
SPDL1-206ENST00000507232 ABCC11Q96J66 1382 aa16.77■□□□□ 0.28
SPDL1-206ENST00000507232 ALKQ9UM73 1620 aa16.77■□□□□ 0.28
SPDL1-206ENST00000507232 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
SPDL1-206ENST00000507232 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
SPDL1-206ENST00000507232 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 PHF23Q9BUL5 403 aaPredicted RBP16.76■□□□□ 0.27
SPDL1-206ENST00000507232 NSD2O96028 1365 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
SPDL1-206ENST00000507232 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
SPDL1-206ENST00000507232 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
SPDL1-206ENST00000507232 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
SPDL1-206ENST00000507232 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
SPDL1-206ENST00000507232 DEKP35659 375 aaKnown RBP16.73■□□□□ 0.27
SPDL1-206ENST00000507232 PLEKHF1Q96S99 279 aa16.73■□□□□ 0.27
SPDL1-206ENST00000507232 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
SPDL1-206ENST00000507232 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
SPDL1-206ENST00000507232 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
SPDL1-206ENST00000507232 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
SPDL1-206ENST00000507232 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
SPDL1-206ENST00000507232 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.27
SPDL1-206ENST00000507232 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
SPDL1-206ENST00000507232 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms