RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FOXO3O43524 673 aa11.39□□□□□ -0.59
VCAN-207ENST00000507162 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
VCAN-207ENST00000507162 EZH2Q15910 746 aaKnown RBP11.39□□□□□ -0.59
VCAN-207ENST00000507162 FAM182BQ5T319 152 aa11.39□□□□□ -0.59
VCAN-207ENST00000507162 METP08581 1390 aa11.39□□□□□ -0.59
VCAN-207ENST00000507162 ABCC5O15440 1437 aa11.38□□□□□ -0.59
VCAN-207ENST00000507162 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
VCAN-207ENST00000507162 C1QTNF8P60827 252 aa11.38□□□□□ -0.59
VCAN-207ENST00000507162 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
VCAN-207ENST00000507162 MYOM2P54296 1465 aa11.38□□□□□ -0.59
VCAN-207ENST00000507162 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 BRWD3Q6RI45 1802 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 VPS72Q15906 364 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 TMEM131LA2VDJ0 1609 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 ANKRD30AQ9BXX3 1397 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 UNC13BO14795 1591 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 GLI3P10071 1580 aa11.37□□□□□ -0.59
VCAN-207ENST00000507162 KANK4Q5T7N3 995 aaPredicted RBP11.36□□□□□ -0.59
VCAN-207ENST00000507162 GCC2Q8IWJ2 1684 aa11.36□□□□□ -0.59
VCAN-207ENST00000507162 FAM98CQ17RN3 349 aaKnown RBP11.35□□□□□ -0.59
VCAN-207ENST00000507162 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
VCAN-207ENST00000507162 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
VCAN-207ENST00000507162 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
VCAN-207ENST00000507162 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
VCAN-207ENST00000507162 SLIT2O94813 1529 aa11.33□□□□□ -0.6
VCAN-207ENST00000507162 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 TRIM37O94972 964 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 APBA3O96018 575 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
VCAN-207ENST00000507162 NBPF8Q3BBV2 869 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 CAMKK2Q96RR4 588 aa11.32□□□□□ -0.6
VCAN-207ENST00000507162 KCNQ2O43526 872 aa11.31□□□□□ -0.6
VCAN-207ENST00000507162 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
VCAN-207ENST00000507162 DAPK1P53355 1430 aa11.3□□□□□ -0.6
VCAN-207ENST00000507162 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
VCAN-207ENST00000507162 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
VCAN-207ENST00000507162 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
VCAN-207ENST00000507162 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
VCAN-207ENST00000507162 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
VCAN-207ENST00000507162 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
VCAN-207ENST00000507162 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
VCAN-207ENST00000507162 LAMC1P11047 1609 aa11.27□□□□□ -0.6
VCAN-207ENST00000507162 NALCNQ8IZF0 1738 aa11.27□□□□□ -0.61
VCAN-207ENST00000507162 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.61
VCAN-207ENST00000507162 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
VCAN-207ENST00000507162 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.61
VCAN-207ENST00000507162 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
VCAN-207ENST00000507162 PXDNQ92626 1479 aa11.26□□□□□ -0.61
VCAN-207ENST00000507162 FAM196AQ6ZSG2 479 aa11.25□□□□□ -0.61
VCAN-207ENST00000507162 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
VCAN-207ENST00000507162 ANKRD50Q9ULJ7 1429 aa11.25□□□□□ -0.61
VCAN-207ENST00000507162 ADGRL2O95490 1459 aa11.24□□□□□ -0.61
VCAN-207ENST00000507162 GIGYF1O75420 1035 aaPredicted RBP11.23□□□□□ -0.61
VCAN-207ENST00000507162 PSME1Q06323 249 aa11.23□□□□□ -0.61
VCAN-207ENST00000507162 POTEHQ6S545 545 aa11.23□□□□□ -0.61
VCAN-207ENST00000507162 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
VCAN-207ENST00000507162 NRXN3Q9Y4C0 1643 aa11.23□□□□□ -0.61
VCAN-207ENST00000507162 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
VCAN-207ENST00000507162 UTRNP46939 3433 aa11.21□□□□□ -0.61
VCAN-207ENST00000507162 CROCC2H7BZ55 1655 aa11.21□□□□□ -0.61
VCAN-207ENST00000507162 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.61
VCAN-207ENST00000507162 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
VCAN-207ENST00000507162 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
VCAN-207ENST00000507162 STK26Q9P289 416 aa11.2□□□□□ -0.62
VCAN-207ENST00000507162 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
VCAN-207ENST00000507162 PARD3Q8TEW0 1356 aa11.19□□□□□ -0.62
VCAN-207ENST00000507162 SPATA31A5Q5VU36 1347 aa11.19□□□□□ -0.62
VCAN-207ENST00000507162 SPATA31A7Q8IWB4 1347 aa11.19□□□□□ -0.62
VCAN-207ENST00000507162 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
VCAN-207ENST00000507162 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
VCAN-207ENST00000507162 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
VCAN-207ENST00000507162 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
VCAN-207ENST00000507162 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
VCAN-207ENST00000507162 APLP2Q06481 763 aa11.18□□□□□ -0.62
VCAN-207ENST00000507162 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
VCAN-207ENST00000507162 NUP155O75694 1391 aa11.17□□□□□ -0.62
VCAN-207ENST00000507162 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
VCAN-207ENST00000507162 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
VCAN-207ENST00000507162 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
VCAN-207ENST00000507162 CCDC144AA2RUR9 1427 aa11.17□□□□□ -0.62
VCAN-207ENST00000507162 PDGFDQ9GZP0 370 aaPredicted RBP11.16□□□□□ -0.62
VCAN-207ENST00000507162 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
VCAN-207ENST00000507162 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
VCAN-207ENST00000507162 E9PCH4 1651 aa11.16□□□□□ -0.62
VCAN-207ENST00000507162 NAIPQ13075 1403 aa11.15□□□□□ -0.62
VCAN-207ENST00000507162 GPR162Q16538 588 aa11.14□□□□□ -0.63
VCAN-207ENST00000507162 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
VCAN-207ENST00000507162 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
VCAN-207ENST00000507162 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
VCAN-207ENST00000507162 NWD2Q9ULI1 1742 aa11.13□□□□□ -0.63
VCAN-207ENST00000507162 ADGRB2O60241 1585 aa11.13□□□□□ -0.63
VCAN-207ENST00000507162 ARHGEF10O15013 1369 aa11.13□□□□□ -0.63
VCAN-207ENST00000507162 TNS1Q9HBL0 1735 aaKnown RBP11.12□□□□□ -0.63
VCAN-207ENST00000507162 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
VCAN-207ENST00000507162 PTGER2P43116 358 aa11.12□□□□□ -0.63
VCAN-207ENST00000507162 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
VCAN-207ENST00000507162 BCL11BQ9C0K0 894 aaPredicted RBP11.12□□□□□ -0.63
VCAN-207ENST00000507162 PRDM11Q9NQV5 511 aa11.12□□□□□ -0.63
VCAN-207ENST00000507162 SPATA31A1Q5TZJ5 1347 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms