RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
SIL1-209ENST00000507002 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
SIL1-209ENST00000507002 WAPLQ7Z5K2 1190 aa17.23■□□□□ 0.35
SIL1-209ENST00000507002 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
SIL1-209ENST00000507002 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
SIL1-209ENST00000507002 RALBP1Q15311 655 aa17.22■□□□□ 0.35
SIL1-209ENST00000507002 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
SIL1-209ENST00000507002 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
SIL1-209ENST00000507002 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
SIL1-209ENST00000507002 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
SIL1-209ENST00000507002 ROBO2Q9HCK4 1378 aa17.2■□□□□ 0.34
SIL1-209ENST00000507002 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
SIL1-209ENST00000507002 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
SIL1-209ENST00000507002 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
SIL1-209ENST00000507002 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
SIL1-209ENST00000507002 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
SIL1-209ENST00000507002 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
SIL1-209ENST00000507002 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
SIL1-209ENST00000507002 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
SIL1-209ENST00000507002 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
SIL1-209ENST00000507002 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
SIL1-209ENST00000507002 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
SIL1-209ENST00000507002 MYBBP1AQ9BQG0 1328 aaKnown RBP17.18■□□□□ 0.34
SIL1-209ENST00000507002 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
SIL1-209ENST00000507002 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
SIL1-209ENST00000507002 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
SIL1-209ENST00000507002 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SIL1-209ENST00000507002 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
SIL1-209ENST00000507002 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
SIL1-209ENST00000507002 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
SIL1-209ENST00000507002 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
SIL1-209ENST00000507002 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
SIL1-209ENST00000507002 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
SIL1-209ENST00000507002 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
SIL1-209ENST00000507002 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
SIL1-209ENST00000507002 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
SIL1-209ENST00000507002 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
SIL1-209ENST00000507002 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
SIL1-209ENST00000507002 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
SIL1-209ENST00000507002 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
SIL1-209ENST00000507002 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
SIL1-209ENST00000507002 KCNA6P17658 529 aa17.09■□□□□ 0.33
SIL1-209ENST00000507002 TERF2IPQ9NYB0 399 aa17.09■□□□□ 0.33
SIL1-209ENST00000507002 ATP7BP35670 1465 aa17.09■□□□□ 0.33
SIL1-209ENST00000507002 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
SIL1-209ENST00000507002 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
SIL1-209ENST00000507002 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
SIL1-209ENST00000507002 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
SIL1-209ENST00000507002 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
SIL1-209ENST00000507002 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
SIL1-209ENST00000507002 NUDT16Q96DE0 195 aaKnown RBP17.06■□□□□ 0.32
SIL1-209ENST00000507002 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
SIL1-209ENST00000507002 NSD2O96028 1365 aa17.05■□□□□ 0.32
SIL1-209ENST00000507002 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
SIL1-209ENST00000507002 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
SIL1-209ENST00000507002 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
SIL1-209ENST00000507002 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
SIL1-209ENST00000507002 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
SIL1-209ENST00000507002 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
SIL1-209ENST00000507002 FMN2Q9NZ56 1722 aa17.03■□□□□ 0.32
SIL1-209ENST00000507002 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
SIL1-209ENST00000507002 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.32
SIL1-209ENST00000507002 HSPA2P54652 639 aa17.01■□□□□ 0.31
SIL1-209ENST00000507002 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
SIL1-209ENST00000507002 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
SIL1-209ENST00000507002 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
SIL1-209ENST00000507002 EDC4Q6P2E9 1401 aaKnown RBP16.98■□□□□ 0.31
SIL1-209ENST00000507002 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
SIL1-209ENST00000507002 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
SIL1-209ENST00000507002 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
SIL1-209ENST00000507002 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
SIL1-209ENST00000507002 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
SIL1-209ENST00000507002 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
SIL1-209ENST00000507002 STRCP1A6NGW2 1772 aa16.96■□□□□ 0.31
SIL1-209ENST00000507002 NRKQ7Z2Y5 1582 aa16.95■□□□□ 0.3
SIL1-209ENST00000507002 FYB1O15117 783 aa16.95■□□□□ 0.3
SIL1-209ENST00000507002 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
SIL1-209ENST00000507002 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
SIL1-209ENST00000507002 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
SIL1-209ENST00000507002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.38e-7■■■■□ 23.2
SIL1-209ENST00000507002 ACEP12821 1306 aa16.93■□□□□ 0.3
SIL1-209ENST00000507002 INSRP06213 1382 aa16.92■□□□□ 0.3
SIL1-209ENST00000507002 RBM33Q96EV2 1170 aaKnown RBP16.92■□□□□ 0.3
SIL1-209ENST00000507002 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
SIL1-209ENST00000507002 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
SIL1-209ENST00000507002 USP6P35125 1406 aa16.9■□□□□ 0.3
SIL1-209ENST00000507002 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
SIL1-209ENST00000507002 ZBED9Q6R2W3 1325 aa16.9■□□□□ 0.3
SIL1-209ENST00000507002 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
SIL1-209ENST00000507002 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
SIL1-209ENST00000507002 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
SIL1-209ENST00000507002 NME9Q86XW9 330 aa16.88■□□□□ 0.29
SIL1-209ENST00000507002 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
SIL1-209ENST00000507002 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms