RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
SFXN1-205ENST00000506963 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
SFXN1-205ENST00000506963 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
SFXN1-205ENST00000506963 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
SFXN1-205ENST00000506963 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
SFXN1-205ENST00000506963 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
SFXN1-205ENST00000506963 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
SFXN1-205ENST00000506963 MST1RQ04912 1400 aa13.84□□□□□ -0.19
SFXN1-205ENST00000506963 ATF3P18847 181 aa13.84□□□□□ -0.19
SFXN1-205ENST00000506963 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
SFXN1-205ENST00000506963 POGKQ9P215 609 aa13.84□□□□□ -0.19
SFXN1-205ENST00000506963 SBNO2Q9Y2G9 1366 aa13.83□□□□□ -0.19
SFXN1-205ENST00000506963 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
SFXN1-205ENST00000506963 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
SFXN1-205ENST00000506963 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
SFXN1-205ENST00000506963 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
SFXN1-205ENST00000506963 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
SFXN1-205ENST00000506963 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
SFXN1-205ENST00000506963 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
SFXN1-205ENST00000506963 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
SFXN1-205ENST00000506963 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
SFXN1-205ENST00000506963 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
SFXN1-205ENST00000506963 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
SFXN1-205ENST00000506963 USP47Q96K76 1375 aa13.77□□□□□ -0.21
SFXN1-205ENST00000506963 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
SFXN1-205ENST00000506963 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
SFXN1-205ENST00000506963 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-205ENST00000506963 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
SFXN1-205ENST00000506963 TESK2Q96S53 571 aa13.75□□□□□ -0.21
SFXN1-205ENST00000506963 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-205ENST00000506963 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
SFXN1-205ENST00000506963 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
SFXN1-205ENST00000506963 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
SFXN1-205ENST00000506963 ATP7BP35670 1465 aa13.74□□□□□ -0.21
SFXN1-205ENST00000506963 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-205ENST00000506963 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
SFXN1-205ENST00000506963 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
SFXN1-205ENST00000506963 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
SFXN1-205ENST00000506963 CDK19Q9BWU1 502 aa13.73□□□□□ -0.21
SFXN1-205ENST00000506963 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
SFXN1-205ENST00000506963 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
SFXN1-205ENST00000506963 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
SFXN1-205ENST00000506963 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-205ENST00000506963 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
SFXN1-205ENST00000506963 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
SFXN1-205ENST00000506963 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
SFXN1-205ENST00000506963 NUDT16Q96DE0 195 aaKnown RBP13.7□□□□□ -0.22
SFXN1-205ENST00000506963 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
SFXN1-205ENST00000506963 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-205ENST00000506963 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
SFXN1-205ENST00000506963 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
SFXN1-205ENST00000506963 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
SFXN1-205ENST00000506963 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
SFXN1-205ENST00000506963 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
SFXN1-205ENST00000506963 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
SFXN1-205ENST00000506963 HSPA1LP34931 641 aa13.68□□□□□ -0.22
SFXN1-205ENST00000506963 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
SFXN1-205ENST00000506963 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
SFXN1-205ENST00000506963 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
SFXN1-205ENST00000506963 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
SFXN1-205ENST00000506963 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
SFXN1-205ENST00000506963 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
SFXN1-205ENST00000506963 PXDNQ92626 1479 aa13.67□□□□□ -0.22
SFXN1-205ENST00000506963 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
SFXN1-205ENST00000506963 TMF1P82094 1093 aa13.65□□□□□ -0.22
SFXN1-205ENST00000506963 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
SFXN1-205ENST00000506963 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
SFXN1-205ENST00000506963 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
SFXN1-205ENST00000506963 FOXO3O43524 673 aa13.64□□□□□ -0.23
SFXN1-205ENST00000506963 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
SFXN1-205ENST00000506963 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
SFXN1-205ENST00000506963 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
SFXN1-205ENST00000506963 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
SFXN1-205ENST00000506963 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
SFXN1-205ENST00000506963 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
SFXN1-205ENST00000506963 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
SFXN1-205ENST00000506963 LRRC59Q96AG4 307 aaKnown RBP13.62□□□□□ -0.23
SFXN1-205ENST00000506963 CPSF1Q10570 1443 aaKnown RBP13.62□□□□□ -0.23
SFXN1-205ENST00000506963 JCADQ9P266 1359 aa13.61□□□□□ -0.23
SFXN1-205ENST00000506963 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
SFXN1-205ENST00000506963 CABP1Q9NZU7 370 aa13.61□□□□□ -0.23
SFXN1-205ENST00000506963 ACEP12821 1306 aa13.61□□□□□ -0.23
SFXN1-205ENST00000506963 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
SFXN1-205ENST00000506963 PSME1Q06323 249 aa13.6□□□□□ -0.23
SFXN1-205ENST00000506963 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
SFXN1-205ENST00000506963 COL22A1Q8NFW1 1626 aaPredicted RBP13.6□□□□□ -0.23
SFXN1-205ENST00000506963 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
SFXN1-205ENST00000506963 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
SFXN1-205ENST00000506963 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
SFXN1-205ENST00000506963 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
SFXN1-205ENST00000506963 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
SFXN1-205ENST00000506963 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.23
SFXN1-205ENST00000506963 USP6P35125 1406 aa13.58□□□□□ -0.24
SFXN1-205ENST00000506963 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
SFXN1-205ENST00000506963 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
SFXN1-205ENST00000506963 MYOM1P52179 1685 aa13.57□□□□□ -0.24
SFXN1-205ENST00000506963 SPATA31A6Q5VVP1 1343 aa13.57□□□□□ -0.24
SFXN1-205ENST00000506963 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
SFXN1-205ENST00000506963 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
SFXN1-205ENST00000506963 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms