RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 DISP3Q9P2K9 1392 aa18.24■□□□□ 0.51
TCOF1-210ENST00000506767 POGKQ9P215 609 aa18.23■□□□□ 0.51
TCOF1-210ENST00000506767 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
TCOF1-210ENST00000506767 MSH6P52701 1360 aa18.22■□□□□ 0.51
TCOF1-210ENST00000506767 DCCP43146 1447 aa18.21■□□□□ 0.51
TCOF1-210ENST00000506767 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
TCOF1-210ENST00000506767 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
TCOF1-210ENST00000506767 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
TCOF1-210ENST00000506767 ADGRB2O60241 1585 aa18.2■□□□□ 0.5
TCOF1-210ENST00000506767 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
TCOF1-210ENST00000506767 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
TCOF1-210ENST00000506767 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
TCOF1-210ENST00000506767 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
TCOF1-210ENST00000506767 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
TCOF1-210ENST00000506767 USP47Q96K76 1375 aa18.17■□□□□ 0.5
TCOF1-210ENST00000506767 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
TCOF1-210ENST00000506767 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
TCOF1-210ENST00000506767 SBNO2Q9Y2G9 1366 aa18.16■□□□□ 0.5
TCOF1-210ENST00000506767 ATF3P18847 181 aa18.15■□□□□ 0.5
TCOF1-210ENST00000506767 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
TCOF1-210ENST00000506767 TOM1O60784 492 aa18.14■□□□□ 0.49
TCOF1-210ENST00000506767 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
TCOF1-210ENST00000506767 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
TCOF1-210ENST00000506767 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
TCOF1-210ENST00000506767 MST1RQ04912 1400 aa18.13■□□□□ 0.49
TCOF1-210ENST00000506767 WASLO00401 505 aaPredicted RBP18.12■□□□□ 0.49
TCOF1-210ENST00000506767 TESK2Q96S53 571 aa18.12■□□□□ 0.49
TCOF1-210ENST00000506767 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
TCOF1-210ENST00000506767 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
TCOF1-210ENST00000506767 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
TCOF1-210ENST00000506767 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
TCOF1-210ENST00000506767 HSPA1LP34931 641 aa18.09■□□□□ 0.49
TCOF1-210ENST00000506767 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
TCOF1-210ENST00000506767 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
TCOF1-210ENST00000506767 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.48
TCOF1-210ENST00000506767 ANKARQ7Z5J8 1434 aa18.07■□□□□ 0.48
TCOF1-210ENST00000506767 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
TCOF1-210ENST00000506767 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
TCOF1-210ENST00000506767 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
TCOF1-210ENST00000506767 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
TCOF1-210ENST00000506767 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
TCOF1-210ENST00000506767 ATP7BP35670 1465 aa18.05■□□□□ 0.48
TCOF1-210ENST00000506767 ROBO1Q9Y6N7 1651 aa18.05■□□□□ 0.48
TCOF1-210ENST00000506767 BRINP3Q76B58 766 aa18.03■□□□□ 0.48
TCOF1-210ENST00000506767 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
TCOF1-210ENST00000506767 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
TCOF1-210ENST00000506767 ORAI2Q96SN7 254 aa18.03■□□□□ 0.48
TCOF1-210ENST00000506767 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
TCOF1-210ENST00000506767 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.48
TCOF1-210ENST00000506767 TOPAZ1Q8N9V7 1692 aa18.02■□□□□ 0.47
TCOF1-210ENST00000506767 TMF1P82094 1093 aa18.01■□□□□ 0.47
TCOF1-210ENST00000506767 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
TCOF1-210ENST00000506767 ESCO1Q5FWF5 840 aa18■□□□□ 0.47
TCOF1-210ENST00000506767 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
TCOF1-210ENST00000506767 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
TCOF1-210ENST00000506767 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
TCOF1-210ENST00000506767 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
TCOF1-210ENST00000506767 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
TCOF1-210ENST00000506767 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
TCOF1-210ENST00000506767 AHDC1Q5TGY3 1603 aaPredicted RBP17.97■□□□□ 0.47
TCOF1-210ENST00000506767 SOCS7O14512 581 aa17.96■□□□□ 0.47
TCOF1-210ENST00000506767 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
TCOF1-210ENST00000506767 CDCA8Q53HL2 280 aa17.95■□□□□ 0.46
TCOF1-210ENST00000506767 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
TCOF1-210ENST00000506767 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
TCOF1-210ENST00000506767 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
TCOF1-210ENST00000506767 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-210ENST00000506767 FOXO3O43524 673 aa17.93■□□□□ 0.46
TCOF1-210ENST00000506767 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
TCOF1-210ENST00000506767 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
TCOF1-210ENST00000506767 NPHP3Q7Z494 1330 aa17.92■□□□□ 0.46
TCOF1-210ENST00000506767 PHLPP1O60346 1717 aa17.92■□□□□ 0.46
TCOF1-210ENST00000506767 PXDNQ92626 1479 aa17.91■□□□□ 0.46
TCOF1-210ENST00000506767 ACEP12821 1306 aa17.91■□□□□ 0.46
TCOF1-210ENST00000506767 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
TCOF1-210ENST00000506767 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
TCOF1-210ENST00000506767 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
TCOF1-210ENST00000506767 MYOM1P52179 1685 aa17.9■□□□□ 0.46
TCOF1-210ENST00000506767 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
TCOF1-210ENST00000506767 CD163L1Q9NR16 1453 aa17.89■□□□□ 0.45
TCOF1-210ENST00000506767 NGDNQ8NEJ9 315 aaKnown RBP17.89■□□□□ 0.45
TCOF1-210ENST00000506767 AKAP12Q02952 1782 aa17.89■□□□□ 0.45
TCOF1-210ENST00000506767 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
TCOF1-210ENST00000506767 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
TCOF1-210ENST00000506767 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
TCOF1-210ENST00000506767 TRPM3Q9HCF6 1732 aaPredicted RBP17.87■□□□□ 0.45
TCOF1-210ENST00000506767 PSME1Q06323 249 aa17.87■□□□□ 0.45
TCOF1-210ENST00000506767 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
TCOF1-210ENST00000506767 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
TCOF1-210ENST00000506767 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
TCOF1-210ENST00000506767 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
TCOF1-210ENST00000506767 MED1Q15648 1581 aaPredicted RBP17.85■□□□□ 0.45
TCOF1-210ENST00000506767 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
TCOF1-210ENST00000506767 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
TCOF1-210ENST00000506767 USP6P35125 1406 aa17.84■□□□□ 0.45
TCOF1-210ENST00000506767 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
TCOF1-210ENST00000506767 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
TCOF1-210ENST00000506767 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
TCOF1-210ENST00000506767 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
TCOF1-210ENST00000506767 A0A1W2PP64 1363 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms