RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 METP08581 1390 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
LIN54-206ENST00000506560 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
LIN54-206ENST00000506560 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
LIN54-206ENST00000506560 LTKP29376 864 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 CDK19Q9BWU1 502 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIN54-206ENST00000506560 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 ANKRD36BQ8N2N9 1353 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 C3P01024 1663 aa16.28■□□□□ 0.2
LIN54-206ENST00000506560 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
LIN54-206ENST00000506560 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.19
LIN54-206ENST00000506560 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIN54-206ENST00000506560 PUS7Q96PZ0 661 aaKnown RBP16.26■□□□□ 0.19
LIN54-206ENST00000506560 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
LIN54-206ENST00000506560 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
LIN54-206ENST00000506560 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
LIN54-206ENST00000506560 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
LIN54-206ENST00000506560 MTHFSP49914 203 aa16.24■□□□□ 0.19
LIN54-206ENST00000506560 ATAD2Q6PL18 1390 aa16.23■□□□□ 0.19
LIN54-206ENST00000506560 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
LIN54-206ENST00000506560 APAF1O14727 1248 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 FBLN1P23142 703 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 FYB1O15117 783 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 INSRP06213 1382 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 POLR3AO14802 1390 aaPredicted RBP16.2■□□□□ 0.18
LIN54-206ENST00000506560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.185e-6■■■□□ 15.5
LIN54-206ENST00000506560 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
LIN54-206ENST00000506560 WASLO00401 505 aaPredicted RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
LIN54-206ENST00000506560 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
LIN54-206ENST00000506560 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 PPP4R2Q9NY27 417 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 TECPR2O15040 1411 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 PLIN1O60240 522 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 MYT1Q01538 1121 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
LIN54-206ENST00000506560 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 NUDT16Q96DE0 195 aaKnown RBP16.15■□□□□ 0.18
LIN54-206ENST00000506560 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 CPS1P31327 1500 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
LIN54-206ENST00000506560 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 NSD2O96028 1365 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
LIN54-206ENST00000506560 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
LIN54-206ENST00000506560 MED14O60244 1454 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 NME9Q86XW9 330 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 SLIT1O75093 1534 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
LIN54-206ENST00000506560 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
LIN54-206ENST00000506560 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
LIN54-206ENST00000506560 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIN54-206ENST00000506560 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
LIN54-206ENST00000506560 ATP7BP35670 1465 aa16.1■□□□□ 0.17
LIN54-206ENST00000506560 SLFN5Q08AF3 891 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
LIN54-206ENST00000506560 TCP11L2Q8N4U5 519 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
LIN54-206ENST00000506560 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms