RNA–Protein interactions for RNA: ENST00000506552.1

PACRGL-213, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 414 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-213ENST00000506552 USP46P62068 366 aa9.39□□□□□ -0.91
PACRGL-213ENST00000506552 FOXC1Q12948 553 aa9.39□□□□□ -0.91
PACRGL-213ENST00000506552 Q3C1V9 767 aa9.39□□□□□ -0.91
PACRGL-213ENST00000506552 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
PACRGL-213ENST00000506552 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
PACRGL-213ENST00000506552 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
PACRGL-213ENST00000506552 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
PACRGL-213ENST00000506552 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
PACRGL-213ENST00000506552 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
PACRGL-213ENST00000506552 AAASQ9NRG9 546 aa9.37□□□□□ -0.91
PACRGL-213ENST00000506552 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
PACRGL-213ENST00000506552 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
PACRGL-213ENST00000506552 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
PACRGL-213ENST00000506552 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
PACRGL-213ENST00000506552 POTECB2RU33 542 aa9.35□□□□□ -0.91
PACRGL-213ENST00000506552 HOXA2O43364 376 aa9.35□□□□□ -0.91
PACRGL-213ENST00000506552 HLA-CQ95604 372 aa9.35□□□□□ -0.91
PACRGL-213ENST00000506552 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
PACRGL-213ENST00000506552 ST8SIA5O15466 376 aa9.34□□□□□ -0.91
PACRGL-213ENST00000506552 CYP4X1Q8N118 509 aa9.34□□□□□ -0.91
PACRGL-213ENST00000506552 TOR4AQ9NXH8 423 aa9.34□□□□□ -0.91
PACRGL-213ENST00000506552 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
PACRGL-213ENST00000506552 AVPP01185 164 aa9.33□□□□□ -0.92
PACRGL-213ENST00000506552 AMHR2Q16671 573 aa9.33□□□□□ -0.92
PACRGL-213ENST00000506552 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
PACRGL-213ENST00000506552 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
PACRGL-213ENST00000506552 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
PACRGL-213ENST00000506552 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
PACRGL-213ENST00000506552 AK7Q96M32 723 aa9.3□□□□□ -0.92
PACRGL-213ENST00000506552 TRIM66O15016 1216 aa9.29□□□□□ -0.92
PACRGL-213ENST00000506552 AXIN1O15169 862 aa9.29□□□□□ -0.92
PACRGL-213ENST00000506552 MMP16P51512 607 aa9.29□□□□□ -0.92
PACRGL-213ENST00000506552 FDX1P10109 184 aa9.28□□□□□ -0.92
PACRGL-213ENST00000506552 SMCPP49901 116 aaPredicted RBP9.28□□□□□ -0.92
PACRGL-213ENST00000506552 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
PACRGL-213ENST00000506552 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
PACRGL-213ENST00000506552 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
PACRGL-213ENST00000506552 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
PACRGL-213ENST00000506552 WNT7AO00755 349 aa9.26□□□□□ -0.93
PACRGL-213ENST00000506552 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
PACRGL-213ENST00000506552 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
PACRGL-213ENST00000506552 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
PACRGL-213ENST00000506552 NDUFV2P19404 249 aa9.25□□□□□ -0.93
PACRGL-213ENST00000506552 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
PACRGL-213ENST00000506552 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
PACRGL-213ENST00000506552 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
PACRGL-213ENST00000506552 TRIM32Q13049 653 aa9.24□□□□□ -0.93
PACRGL-213ENST00000506552 MOXD2PA6NHM9 499 aa9.23□□□□□ -0.93
PACRGL-213ENST00000506552 JUNDP17535 347 aa9.23□□□□□ -0.93
PACRGL-213ENST00000506552 RETREG3Q86VR2 466 aa9.23□□□□□ -0.93
PACRGL-213ENST00000506552 SNIP1Q8TAD8 396 aaKnown RBP9.23□□□□□ -0.93
PACRGL-213ENST00000506552 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
PACRGL-213ENST00000506552 GMPR2Q9P2T1 348 aaKnown RBP9.23□□□□□ -0.93
PACRGL-213ENST00000506552 DACH1Q9UI36 760 aa9.22□□□□□ -0.93
PACRGL-213ENST00000506552 C11orf95C9JLR9 678 aaPredicted RBP9.21□□□□□ -0.94
PACRGL-213ENST00000506552 MS4A1P11836 297 aa9.21□□□□□ -0.94
PACRGL-213ENST00000506552 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
PACRGL-213ENST00000506552 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
PACRGL-213ENST00000506552 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
PACRGL-213ENST00000506552 PDE4DQ08499 809 aa9.2□□□□□ -0.94
PACRGL-213ENST00000506552 SMPD1P17405 629 aa9.19□□□□□ -0.94
PACRGL-213ENST00000506552 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
PACRGL-213ENST00000506552 BCANQ96GW7 911 aa9.18□□□□□ -0.94
PACRGL-213ENST00000506552 WFS1O76024 890 aa9.17□□□□□ -0.94
PACRGL-213ENST00000506552 MTMR2Q13614 643 aa9.17□□□□□ -0.94
PACRGL-213ENST00000506552 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
PACRGL-213ENST00000506552 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
PACRGL-213ENST00000506552 WNT7BP56706 349 aa9.16□□□□□ -0.94
PACRGL-213ENST00000506552 RSBN1LQ6PCB5 846 aaPredicted RBP9.16□□□□□ -0.94
PACRGL-213ENST00000506552 PRR7Q8TB68 274 aa9.16□□□□□ -0.94
PACRGL-213ENST00000506552 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
PACRGL-213ENST00000506552 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
PACRGL-213ENST00000506552 GJA5P36382 358 aa9.15□□□□□ -0.94
PACRGL-213ENST00000506552 SPTLC1O15269 473 aa9.14□□□□□ -0.95
PACRGL-213ENST00000506552 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
PACRGL-213ENST00000506552 RIC3Q7Z5B4 369 aa9.14□□□□□ -0.95
PACRGL-213ENST00000506552 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
PACRGL-213ENST00000506552 J3QL48 77 aa9.13□□□□□ -0.95
PACRGL-213ENST00000506552 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
PACRGL-213ENST00000506552 PTPRNQ16849 979 aa9.12□□□□□ -0.95
PACRGL-213ENST00000506552 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
PACRGL-213ENST00000506552 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
PACRGL-213ENST00000506552 TRIM47Q96LD4 638 aa9.12□□□□□ -0.95
PACRGL-213ENST00000506552 SKOR1P84550 965 aa9.11□□□□□ -0.95
PACRGL-213ENST00000506552 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
PACRGL-213ENST00000506552 DESI1Q6ICB0 168 aa9.11□□□□□ -0.95
PACRGL-213ENST00000506552 ZBTB3Q9H5J0 574 aa9.11□□□□□ -0.95
PACRGL-213ENST00000506552 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
PACRGL-213ENST00000506552 HRCP23327 699 aa9.1□□□□□ -0.95
PACRGL-213ENST00000506552 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
PACRGL-213ENST00000506552 HPS1Q92902 700 aa9.1□□□□□ -0.95
PACRGL-213ENST00000506552 WIPF1O43516 503 aa9.09□□□□□ -0.95
PACRGL-213ENST00000506552 KCNH2Q12809 1159 aa9.09□□□□□ -0.95
PACRGL-213ENST00000506552 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
PACRGL-213ENST00000506552 MYSM1Q5VVJ2 828 aa9.09□□□□□ -0.95
PACRGL-213ENST00000506552 SNRPBP14678 240 aaKnown RBP9.08□□□□□ -0.96
PACRGL-213ENST00000506552 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
PACRGL-213ENST00000506552 CABLES1Q8TDN4 633 aa9.08□□□□□ -0.96
PACRGL-213ENST00000506552 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
PACRGL-213ENST00000506552 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms