RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
COPS4-204ENST00000506443 GLI3P10071 1580 aa13.95□□□□□ -0.18
COPS4-204ENST00000506443 MYOM2P54296 1465 aa13.94□□□□□ -0.18
COPS4-204ENST00000506443 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
COPS4-204ENST00000506443 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
COPS4-204ENST00000506443 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
COPS4-204ENST00000506443 USP21Q9UK80 565 aa13.93□□□□□ -0.18
COPS4-204ENST00000506443 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
COPS4-204ENST00000506443 PXDNQ92626 1479 aa13.91□□□□□ -0.18
COPS4-204ENST00000506443 KCNA4P22459 653 aa13.9□□□□□ -0.18
COPS4-204ENST00000506443 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
COPS4-204ENST00000506443 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
COPS4-204ENST00000506443 NUP155O75694 1391 aa13.9□□□□□ -0.18
COPS4-204ENST00000506443 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
COPS4-204ENST00000506443 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
COPS4-204ENST00000506443 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
COPS4-204ENST00000506443 LRP5O75197 1615 aa13.89□□□□□ -0.19
COPS4-204ENST00000506443 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
COPS4-204ENST00000506443 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
COPS4-204ENST00000506443 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
COPS4-204ENST00000506443 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
COPS4-204ENST00000506443 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
COPS4-204ENST00000506443 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
COPS4-204ENST00000506443 KIF1BO60333 1816 aa13.86□□□□□ -0.19
COPS4-204ENST00000506443 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
COPS4-204ENST00000506443 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
COPS4-204ENST00000506443 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
COPS4-204ENST00000506443 PPLO60437 1756 aa13.84□□□□□ -0.19
COPS4-204ENST00000506443 USP32Q8NFA0 1604 aa13.84□□□□□ -0.19
COPS4-204ENST00000506443 ITGAEP38570 1179 aa13.84□□□□□ -0.19
COPS4-204ENST00000506443 ROCK1Q13464 1354 aa13.83□□□□□ -0.19
COPS4-204ENST00000506443 SLIT2O94813 1529 aa13.82□□□□□ -0.2
COPS4-204ENST00000506443 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
COPS4-204ENST00000506443 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
COPS4-204ENST00000506443 PSDA5PKW4 1024 aaPredicted RBP13.81□□□□□ -0.2
COPS4-204ENST00000506443 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
COPS4-204ENST00000506443 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
COPS4-204ENST00000506443 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
COPS4-204ENST00000506443 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
COPS4-204ENST00000506443 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
COPS4-204ENST00000506443 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
COPS4-204ENST00000506443 NAIPQ13075 1403 aa13.78□□□□□ -0.2
COPS4-204ENST00000506443 FOXO3O43524 673 aa13.77□□□□□ -0.21
COPS4-204ENST00000506443 CAPN15O75808 1086 aa13.77□□□□□ -0.21
COPS4-204ENST00000506443 NRAPQ86VF7 1730 aa13.77□□□□□ -0.21
COPS4-204ENST00000506443 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
COPS4-204ENST00000506443 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
COPS4-204ENST00000506443 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
COPS4-204ENST00000506443 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
COPS4-204ENST00000506443 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
COPS4-204ENST00000506443 TNS1Q9HBL0 1735 aaKnown RBP13.75□□□□□ -0.21
COPS4-204ENST00000506443 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
COPS4-204ENST00000506443 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
COPS4-204ENST00000506443 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
COPS4-204ENST00000506443 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
COPS4-204ENST00000506443 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
COPS4-204ENST00000506443 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
COPS4-204ENST00000506443 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
COPS4-204ENST00000506443 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
COPS4-204ENST00000506443 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
COPS4-204ENST00000506443 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
COPS4-204ENST00000506443 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
COPS4-204ENST00000506443 HRCP23327 699 aa13.7□□□□□ -0.22
COPS4-204ENST00000506443 ADGRF5Q8IZF2 1346 aa13.69□□□□□ -0.22
COPS4-204ENST00000506443 DSG3P32926 999 aa13.69□□□□□ -0.22
COPS4-204ENST00000506443 STK26Q9P289 416 aa13.69□□□□□ -0.22
COPS4-204ENST00000506443 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
COPS4-204ENST00000506443 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
COPS4-204ENST00000506443 TECPR2O15040 1411 aa13.68□□□□□ -0.22
COPS4-204ENST00000506443 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
COPS4-204ENST00000506443 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
COPS4-204ENST00000506443 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
COPS4-204ENST00000506443 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
COPS4-204ENST00000506443 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
COPS4-204ENST00000506443 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
COPS4-204ENST00000506443 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
COPS4-204ENST00000506443 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
COPS4-204ENST00000506443 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
COPS4-204ENST00000506443 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
COPS4-204ENST00000506443 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
COPS4-204ENST00000506443 VPS72Q15906 364 aa13.64□□□□□ -0.23
COPS4-204ENST00000506443 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
COPS4-204ENST00000506443 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
COPS4-204ENST00000506443 A0A0G2JS52 829 aa13.63□□□□□ -0.23
COPS4-204ENST00000506443 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
COPS4-204ENST00000506443 MYT1Q01538 1121 aa13.63□□□□□ -0.23
COPS4-204ENST00000506443 SF3B2Q13435 895 aaKnown RBP13.63□□□□□ -0.23
COPS4-204ENST00000506443 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
COPS4-204ENST00000506443 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
COPS4-204ENST00000506443 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
COPS4-204ENST00000506443 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
COPS4-204ENST00000506443 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
COPS4-204ENST00000506443 RREB1Q92766 1687 aa13.62□□□□□ -0.23
COPS4-204ENST00000506443 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
COPS4-204ENST00000506443 SPATA31E1Q6ZUB1 1445 aa13.61□□□□□ -0.23
COPS4-204ENST00000506443 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
COPS4-204ENST00000506443 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
COPS4-204ENST00000506443 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
COPS4-204ENST00000506443 YTHDC2Q9H6S0 1430 aaKnown RBP13.6□□□□□ -0.23
COPS4-204ENST00000506443 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms