RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 WBP1LQ9NX94 342 aa14.71□□□□□ -0.05
RETREG1-203ENST00000506441 TIMELESSQ9UNS1 1208 aa14.71□□□□□ -0.05
RETREG1-203ENST00000506441 MYT1LQ9UL68 1186 aa14.7□□□□□ -0.06
RETREG1-203ENST00000506441 HELBQ8NG08 1087 aaPredicted RBP14.69□□□□□ -0.06
RETREG1-203ENST00000506441 PRM3Q9NNZ6 103 aa14.69□□□□□ -0.06
RETREG1-203ENST00000506441 APLP1P51693 650 aa14.68□□□□□ -0.06
RETREG1-203ENST00000506441 GUCA2AQ02747 115 aa14.68□□□□□ -0.06
RETREG1-203ENST00000506441 QPCTQ16769 361 aa14.68□□□□□ -0.06
RETREG1-203ENST00000506441 PUS10Q3MIT2 529 aaKnown RBP14.68□□□□□ -0.06
RETREG1-203ENST00000506441 PCDHGC3Q9UN70 934 aa14.67□□□□□ -0.06
RETREG1-203ENST00000506441 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
RETREG1-203ENST00000506441 AP1G2O75843 785 aa14.66□□□□□ -0.06
RETREG1-203ENST00000506441 CABLES1Q8TDN4 633 aa14.66□□□□□ -0.06
RETREG1-203ENST00000506441 SLC27A5Q9Y2P5 690 aa14.66□□□□□ -0.06
RETREG1-203ENST00000506441 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
RETREG1-203ENST00000506441 PTPN5P54829 565 aa14.65□□□□□ -0.06
RETREG1-203ENST00000506441 RETREG3Q86VR2 466 aa14.65□□□□□ -0.06
RETREG1-203ENST00000506441 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
RETREG1-203ENST00000506441 HLA-CQ95604 372 aa14.64□□□□□ -0.07
RETREG1-203ENST00000506441 RAD21O60216 631 aa14.63□□□□□ -0.07
RETREG1-203ENST00000506441 UBTFP17480 764 aaKnown RBP14.63□□□□□ -0.07
RETREG1-203ENST00000506441 SCUBE3Q8IX30 993 aa14.63□□□□□ -0.07
RETREG1-203ENST00000506441 TSC1Q92574 1164 aa14.63□□□□□ -0.07
RETREG1-203ENST00000506441 ZMYND15Q9H091 742 aa14.63□□□□□ -0.07
RETREG1-203ENST00000506441 MCM6Q14566 821 aa14.59□□□□□ -0.07
RETREG1-203ENST00000506441 USB1Q9BQ65 265 aaKnown RBP14.59□□□□□ -0.07
RETREG1-203ENST00000506441 SOCS7O14512 581 aa14.58□□□□□ -0.08
RETREG1-203ENST00000506441 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.08
RETREG1-203ENST00000506441 PRR7Q8TB68 274 aa14.58□□□□□ -0.08
RETREG1-203ENST00000506441 DESI1Q6ICB0 168 aa14.57□□□□□ -0.08
RETREG1-203ENST00000506441 BRICD5Q6PL45 260 aa14.57□□□□□ -0.08
RETREG1-203ENST00000506441 HCSTQ9UBK5 93 aa14.57□□□□□ -0.08
RETREG1-203ENST00000506441 WWC1Q8IX03 1113 aa14.56□□□□□ -0.08
RETREG1-203ENST00000506441 COPS2P61201 443 aa14.55□□□□□ -0.08
RETREG1-203ENST00000506441 SYMPKQ92797 1274 aaKnown RBP14.55□□□□□ -0.08
RETREG1-203ENST00000506441 IL21Q9HBE4 155 aa14.54□□□□□ -0.08
RETREG1-203ENST00000506441 USP17L8P0C7I0 530 aa14.53□□□□□ -0.08
RETREG1-203ENST00000506441 RNF166Q96A37 237 aaPredicted RBP14.53□□□□□ -0.08
RETREG1-203ENST00000506441 PNMA1Q8ND90 353 aa14.52□□□□□ -0.09
RETREG1-203ENST00000506441 SPSB2Q99619 263 aa14.52□□□□□ -0.09
RETREG1-203ENST00000506441 CFAP99D6REC4 459 aa14.51□□□□□ -0.09
RETREG1-203ENST00000506441 ZPR1O75312 459 aa14.51□□□□□ -0.09
RETREG1-203ENST00000506441 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
RETREG1-203ENST00000506441 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
RETREG1-203ENST00000506441 CTDSPL2Q05D32 466 aa14.5□□□□□ -0.09
RETREG1-203ENST00000506441 RNF19BQ6ZMZ0 732 aa14.5□□□□□ -0.09
RETREG1-203ENST00000506441 A6NJR5 290 aa14.49□□□□□ -0.09
RETREG1-203ENST00000506441 THAP11Q96EK4 314 aa14.49□□□□□ -0.09
RETREG1-203ENST00000506441 MTRQ99707 1265 aa14.49□□□□□ -0.09
RETREG1-203ENST00000506441 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
RETREG1-203ENST00000506441 MSS51Q4VC12 460 aa14.47□□□□□ -0.09
RETREG1-203ENST00000506441 ADH1BP00325 375 aa14.46□□□□□ -0.09
RETREG1-203ENST00000506441 JUNDP17535 347 aa14.45□□□□□ -0.1
RETREG1-203ENST00000506441 LYPD8Q6UX82 237 aa14.44□□□□□ -0.1
RETREG1-203ENST00000506441 TJAP1Q5JTD0 557 aa14.43□□□□□ -0.1
RETREG1-203ENST00000506441 MTMR14Q8NCE2 650 aa14.43□□□□□ -0.1
RETREG1-203ENST00000506441 NDUFB9Q9Y6M9 179 aa14.43□□□□□ -0.1
RETREG1-203ENST00000506441 PTPRNQ16849 979 aa14.42□□□□□ -0.1
RETREG1-203ENST00000506441 KCNC4Q03721 635 aa14.4□□□□□ -0.1
RETREG1-203ENST00000506441 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.1
RETREG1-203ENST00000506441 SLC6A16Q9GZN6 736 aa14.4□□□□□ -0.1
RETREG1-203ENST00000506441 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
RETREG1-203ENST00000506441 LRRN4Q8WUT4 740 aa14.39□□□□□ -0.11
RETREG1-203ENST00000506441 PROSER2Q86WR7 435 aaPredicted RBP14.38□□□□□ -0.11
RETREG1-203ENST00000506441 MMP16P51512 607 aa14.37□□□□□ -0.11
RETREG1-203ENST00000506441 FAM160A2Q8N612 972 aaPredicted RBP14.37□□□□□ -0.11
RETREG1-203ENST00000506441 DXOO77932 396 aaKnown RBP14.36□□□□□ -0.11
RETREG1-203ENST00000506441 GGCXP38435 758 aa14.36□□□□□ -0.11
RETREG1-203ENST00000506441 ZNF516Q92618 1163 aa14.36□□□□□ -0.11
RETREG1-203ENST00000506441 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
RETREG1-203ENST00000506441 CTHP32929 405 aa14.35□□□□□ -0.11
RETREG1-203ENST00000506441 ABL2P42684 1182 aa14.35□□□□□ -0.11
RETREG1-203ENST00000506441 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
RETREG1-203ENST00000506441 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
RETREG1-203ENST00000506441 PER1O15534 1290 aaPredicted RBP14.34□□□□□ -0.11
RETREG1-203ENST00000506441 TRAK2O60296 914 aa14.34□□□□□ -0.11
RETREG1-203ENST00000506441 CCNYL3P0C7X3 344 aa14.34□□□□□ -0.11
RETREG1-203ENST00000506441 WASHC4Q2M389 1173 aa14.34□□□□□ -0.11
RETREG1-203ENST00000506441 TLL1O43897 1013 aa14.33□□□□□ -0.12
RETREG1-203ENST00000506441 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
RETREG1-203ENST00000506441 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
RETREG1-203ENST00000506441 NR6A1Q15406 480 aa14.32□□□□□ -0.12
RETREG1-203ENST00000506441 POM121Q96HA1 1249 aa14.32□□□□□ -0.12
RETREG1-203ENST00000506441 EVA1BQ9NVM1 165 aa14.32□□□□□ -0.12
RETREG1-203ENST00000506441 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
RETREG1-203ENST00000506441 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
RETREG1-203ENST00000506441 HMX1Q9NP08 348 aaPredicted RBP14.31□□□□□ -0.12
RETREG1-203ENST00000506441 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
RETREG1-203ENST00000506441 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
RETREG1-203ENST00000506441 KCNH2Q12809 1159 aa14.29□□□□□ -0.12
RETREG1-203ENST00000506441 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
RETREG1-203ENST00000506441 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
RETREG1-203ENST00000506441 MMRN1Q13201 1228 aa14.27□□□□□ -0.13
RETREG1-203ENST00000506441 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
RETREG1-203ENST00000506441 FKBPLQ9UIM3 349 aa14.26□□□□□ -0.13
RETREG1-203ENST00000506441 F12P00748 615 aaPredicted RBP14.25□□□□□ -0.13
RETREG1-203ENST00000506441 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
RETREG1-203ENST00000506441 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
RETREG1-203ENST00000506441 PRDM9Q9NQV7 894 aa14.25□□□□□ -0.13
RETREG1-203ENST00000506441 S1PR4O95977 384 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms