RNA–Protein interactions for RNA: ENST00000506348.1

CDHR2-203, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,005 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-203ENST00000506348 TRAK2O60296 914 aa13.85□□□□□ -0.19
CDHR2-203ENST00000506348 MRE11P49959 708 aa13.84□□□□□ -0.19
CDHR2-203ENST00000506348 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CDHR2-203ENST00000506348 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
CDHR2-203ENST00000506348 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
CDHR2-203ENST00000506348 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
CDHR2-203ENST00000506348 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
CDHR2-203ENST00000506348 GOLGA6L22H0YM25 854 aa13.83□□□□□ -0.2
CDHR2-203ENST00000506348 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
CDHR2-203ENST00000506348 DDX19BQ9UMR2 479 aa13.82□□□□□ -0.2
CDHR2-203ENST00000506348 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
CDHR2-203ENST00000506348 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
CDHR2-203ENST00000506348 PTMSP20962 102 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 MTHFSP49914 203 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 PLXNC1O60486 1568 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 IPO8O15397 1037 aaKnown RBP13.81□□□□□ -0.2
CDHR2-203ENST00000506348 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 CDC42BPBQ9Y5S2 1711 aa13.81□□□□□ -0.2
CDHR2-203ENST00000506348 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
CDHR2-203ENST00000506348 RLBP1P12271 317 aa13.8□□□□□ -0.2
CDHR2-203ENST00000506348 AFAP1Q8N556 730 aa13.8□□□□□ -0.2
CDHR2-203ENST00000506348 XRCC6P12956 609 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDHR2-203ENST00000506348 ANTXR1Q9H6X2 564 aa13.8□□□□□ -0.2
CDHR2-203ENST00000506348 RRAGDQ9NQL2 400 aaPredicted RBP13.8□□□□□ -0.2
CDHR2-203ENST00000506348 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
CDHR2-203ENST00000506348 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
CDHR2-203ENST00000506348 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
CDHR2-203ENST00000506348 TNNQ9UQP3 1299 aa13.78□□□□□ -0.2
CDHR2-203ENST00000506348 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
CDHR2-203ENST00000506348 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
CDHR2-203ENST00000506348 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
CDHR2-203ENST00000506348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDHR2-203ENST00000506348 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
CDHR2-203ENST00000506348 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
CDHR2-203ENST00000506348 SKOR2Q2VWA4 1001 aaPredicted RBP13.77□□□□□ -0.21
CDHR2-203ENST00000506348 PLCH2O75038 1416 aa13.77□□□□□ -0.21
CDHR2-203ENST00000506348 HSP90AA2PQ14568 343 aaPredicted RBP13.76□□□□□ -0.21
CDHR2-203ENST00000506348 GRPEL1Q9HAV7 217 aa13.76□□□□□ -0.21
CDHR2-203ENST00000506348 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
CDHR2-203ENST00000506348 TRPM2O94759 1503 aa13.75□□□□□ -0.21
CDHR2-203ENST00000506348 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
CDHR2-203ENST00000506348 CLCN1P35523 988 aa13.75□□□□□ -0.21
CDHR2-203ENST00000506348 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
CDHR2-203ENST00000506348 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
CDHR2-203ENST00000506348 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 TRAPPC8Q9Y2L5 1435 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 KIF16BQ96L93 1317 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
CDHR2-203ENST00000506348 LNPKQ9C0E8 428 aa13.73□□□□□ -0.21
CDHR2-203ENST00000506348 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
CDHR2-203ENST00000506348 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
CDHR2-203ENST00000506348 ESPNB1AK53 854 aa13.72□□□□□ -0.21
CDHR2-203ENST00000506348 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
CDHR2-203ENST00000506348 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
CDHR2-203ENST00000506348 PTPRTO14522 1441 aa13.71□□□□□ -0.21
CDHR2-203ENST00000506348 TRIM27P14373 513 aa13.71□□□□□ -0.22
CDHR2-203ENST00000506348 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
CDHR2-203ENST00000506348 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
CDHR2-203ENST00000506348 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
CDHR2-203ENST00000506348 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
CDHR2-203ENST00000506348 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
CDHR2-203ENST00000506348 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
CDHR2-203ENST00000506348 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
CDHR2-203ENST00000506348 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDHR2-203ENST00000506348 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
CDHR2-203ENST00000506348 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
CDHR2-203ENST00000506348 MSNP26038 577 aaKnown RBP13.69□□□□□ -0.22
CDHR2-203ENST00000506348 NLRP1Q9C000 1473 aa13.69□□□□□ -0.22
CDHR2-203ENST00000506348 RIPK4P57078 832 aa13.68□□□□□ -0.22
CDHR2-203ENST00000506348 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
CDHR2-203ENST00000506348 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
CDHR2-203ENST00000506348 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
CDHR2-203ENST00000506348 RRP9O43818 475 aaKnown RBP13.68□□□□□ -0.22
CDHR2-203ENST00000506348 TNPO1Q92973 898 aaKnown RBP13.68□□□□□ -0.22
CDHR2-203ENST00000506348 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 TMPOP42166 694 aaKnown RBP13.67□□□□□ -0.22
CDHR2-203ENST00000506348 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
CDHR2-203ENST00000506348 NSD2O96028 1365 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 DDX49Q9Y6V7 483 aaKnown RBP13.67□□□□□ -0.22
CDHR2-203ENST00000506348 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 SNX21Q969T3 373 aa13.67□□□□□ -0.22
CDHR2-203ENST00000506348 NOS1P29475 1434 aa13.66□□□□□ -0.22
CDHR2-203ENST00000506348 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
CDHR2-203ENST00000506348 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
CDHR2-203ENST00000506348 MYOM2P54296 1465 aa13.66□□□□□ -0.22
CDHR2-203ENST00000506348 GGT6Q6P531 493 aa13.66□□□□□ -0.22
CDHR2-203ENST00000506348 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
CDHR2-203ENST00000506348 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
CDHR2-203ENST00000506348 ABCC1P33527 1531 aa13.65□□□□□ -0.22
CDHR2-203ENST00000506348 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
CDHR2-203ENST00000506348 CYB5RLQ6IPT4 315 aa13.65□□□□□ -0.22
CDHR2-203ENST00000506348 MYOM1P52179 1685 aa13.65□□□□□ -0.23
CDHR2-203ENST00000506348 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
CDHR2-203ENST00000506348 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
CDHR2-203ENST00000506348 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms