RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 CSPP1Q1MSJ5 1256 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 HSP90AB3PQ58FF7 597 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 SKAP1Q86WV1 359 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 RBM42Q9BTD8 480 aaKnown RBP3.09□□□□□ -1.92
ITGA1-204ENST00000506275 SMC3Q9UQE7 1217 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 FIBPO43427 364 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 ZKSCAN1P17029 563 aaPredicted RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CAVIN1Q6NZI2 390 aaKnown RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 SASS6Q6UVJ0 657 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 TSPYL4Q9UJ04 414 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 BRPF3Q9ULD4 1205 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 TPM2P07951 284 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 PIP4K2BP78356 416 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 SETQ01105 290 aaPredicted RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 G3BP1Q13283 466 aaKnown RBP eCLIP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 TAF3Q5VWG9 929 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 RUFY1Q96T51 708 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 KIF3AQ9Y496 699 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 MYL6BP14649 208 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 SLC4A8Q2Y0W8 1093 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC97Q96F63 343 aaPredicted RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 AK7Q96M32 723 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 ERICH2A1L162 156 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 H0YHG0 523 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 RALYLQ86SE5 291 aaKnown RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 NLRP13Q86W25 1043 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 AMOTL1Q8IY63 956 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC82Q8N4S0 544 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CDCA7LQ96GN5 454 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 RBM5P52756 815 aaKnown RBP eCLIP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CAGE1Q8TC20 777 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 LARP6Q9BRS8 491 aaKnown RBP3.08□□□□□ -1.92
ITGA1-204ENST00000506275 RAB3GAP2Q9H2M9 1393 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 DNA2P51530 1060 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 CABP2Q9NPB3 220 aa3.08□□□□□ -1.92
ITGA1-204ENST00000506275 SMC2O95347 1197 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 FAM193AP78312 1265 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ZKSCAN2Q63HK3 967 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC70Q6NSX1 233 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 BICDL1Q6ZP65 573 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TAX1BP1Q86VP1 789 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 MNS1Q8NEH6 495 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ZNF219Q9P2Y4 722 aaPredicted RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 SSBP05455 408 aaKnown RBP eCLIP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 DHX8Q14562 1220 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ENOX2Q16206 610 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 AXDND1Q5T1B0 1012 aaPredicted RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TRIM5Q9C035 493 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TDRD9Q8NDG6 1382 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 SURF6O75683 361 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TRERF1Q96PN7 1200 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TSPYL1Q9H0U9 437 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC180Q9P1Z9 1646 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 NUMA1Q14980 2115 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 SOGA1O94964 1423 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 NEK4P51957 841 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 TMX1Q9H3N1 280 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 PRPF40AO75400 957 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ANKRD20A12PQ8NF67 263 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ZFP91Q96JP5 570 aaPredicted RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 PODXL2Q9NZ53 605 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 GOLGA3Q08378 1498 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 DDX11L8A8MPP1 907 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 FKBP4Q02790 459 aaKnown RBP eCLIP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 GRM1Q13255 1194 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 RALBP1Q15311 655 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 ZSCAN29Q8IWY8 852 aaPredicted RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 FAM43AQ8N2R8 423 aa3.07□□□□□ -1.92
ITGA1-204ENST00000506275 SEPT11Q9NVA2 429 aaKnown RBP3.07□□□□□ -1.92
ITGA1-204ENST00000506275 CALRP27797 417 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 RRP1P56182 461 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 NLRP6P59044 892 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 WDR78Q5VTH9 848 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 NUP133Q8WUM0 1156 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 SRRTQ9BXP5 876 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 CGNL1Q0VF96 1302 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 CCER2I3L3R5 266 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 GPS2Q13227 327 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 RAPGEF4Q8WZA2 1011 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 TSR2Q969E8 191 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 MIS18AQ9NYP9 233 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 SERPINA10Q9UK55 444 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 LRRFIP2Q9Y608 721 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 ERICH4A6NGS2 130 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 SAFBQ15424 915 aaKnown RBP eCLIP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 EFCAB2Q5VUJ9 269 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 DZIP1LQ8IYY4 767 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 PDCL3Q9H2J4 239 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 E9PSI1 815 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 NFKBIBQ15653 356 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC73Q6ZRK6 1079 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 ABTB2Q8N961 1025 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 ZNF526Q8TF50 670 aaPredicted RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 RUFY2Q8WXA3 655 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 FSD1Q9BTV5 496 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 C22orf23Q9BZE7 217 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 ATP6V1DQ9Y5K8 247 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 WRNQ14191 1432 aaPredicted RBP eCLIP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 KRT18P05783 430 aaKnown RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 SSR1P43307 286 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms