RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 EIF3AQ14152 1382 aaKnown RBP22.45■■□□□ 1.18
AFF1-205ENST00000504956 MSH6P52701 1360 aa22.44■■□□□ 1.18
AFF1-205ENST00000504956 USP47Q96K76 1375 aa22.43■■□□□ 1.18
AFF1-205ENST00000504956 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
AFF1-205ENST00000504956 ADGRB2O60241 1585 aa22.42■■□□□ 1.18
AFF1-205ENST00000504956 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
AFF1-205ENST00000504956 MINK1Q8N4C8 1332 aaPredicted RBP22.41■■□□□ 1.18
AFF1-205ENST00000504956 FMN2Q9NZ56 1722 aa22.4■■□□□ 1.18
AFF1-205ENST00000504956 HIRIP3Q9BW71 556 aaPredicted RBP22.4■■□□□ 1.18
AFF1-205ENST00000504956 C19orf44Q9H6X5 657 aa22.39■■□□□ 1.18
AFF1-205ENST00000504956 RGPD8O14715 1765 aaPredicted RBP22.39■■□□□ 1.17
AFF1-205ENST00000504956 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
AFF1-205ENST00000504956 DCCP43146 1447 aa22.37■■□□□ 1.17
AFF1-205ENST00000504956 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
AFF1-205ENST00000504956 ATF3P18847 181 aa22.35■■□□□ 1.17
AFF1-205ENST00000504956 TULP4Q9NRJ4 1543 aa22.34■■□□□ 1.17
AFF1-205ENST00000504956 USP32Q8NFA0 1604 aa22.33■■□□□ 1.16
AFF1-205ENST00000504956 MST1RQ04912 1400 aa22.32■■□□□ 1.16
AFF1-205ENST00000504956 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
AFF1-205ENST00000504956 CADPS2Q86UW7 1296 aa22.32■■□□□ 1.16
AFF1-205ENST00000504956 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
AFF1-205ENST00000504956 EIF4G2P78344 907 aaKnown RBP eCLIP22.31■■□□□ 1.168e-7■■■■■ 28.7
AFF1-205ENST00000504956 SBNO2Q9Y2G9 1366 aa22.3■■□□□ 1.16
AFF1-205ENST00000504956 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
AFF1-205ENST00000504956 WASLO00401 505 aaPredicted RBP22.3■■□□□ 1.16
AFF1-205ENST00000504956 ITSN1Q15811 1721 aa22.29■■□□□ 1.16
AFF1-205ENST00000504956 ROBO1Q9Y6N7 1651 aa22.29■■□□□ 1.16
AFF1-205ENST00000504956 TOM1O60784 492 aa22.29■■□□□ 1.16
AFF1-205ENST00000504956 TESK2Q96S53 571 aa22.28■■□□□ 1.16
AFF1-205ENST00000504956 TOPAZ1Q8N9V7 1692 aa22.27■■□□□ 1.16
AFF1-205ENST00000504956 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.15
AFF1-205ENST00000504956 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
AFF1-205ENST00000504956 PIP4K2BP78356 416 aa22.26■■□□□ 1.15
AFF1-205ENST00000504956 SLAIN2Q9P270 581 aa22.26■■□□□ 1.15
AFF1-205ENST00000504956 EVC2Q86UK5 1308 aa22.25■■□□□ 1.15
AFF1-205ENST00000504956 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
AFF1-205ENST00000504956 ATP7BP35670 1465 aa22.25■■□□□ 1.15
AFF1-205ENST00000504956 SRPK2P78362 688 aaKnown RBP22.23■■□□□ 1.15
AFF1-205ENST00000504956 CABP2Q9NPB3 220 aa22.23■■□□□ 1.15
AFF1-205ENST00000504956 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
AFF1-205ENST00000504956 PRR36Q9H6K5 1346 aa22.23■■□□□ 1.15
AFF1-205ENST00000504956 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
AFF1-205ENST00000504956 KIF1AQ12756 1690 aa22.21■■□□□ 1.15
AFF1-205ENST00000504956 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
AFF1-205ENST00000504956 TMF1P82094 1093 aa22.19■■□□□ 1.14
AFF1-205ENST00000504956 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
AFF1-205ENST00000504956 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
AFF1-205ENST00000504956 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
AFF1-205ENST00000504956 BRINP3Q76B58 766 aa22.18■■□□□ 1.14
AFF1-205ENST00000504956 MYOM1P52179 1685 aa22.16■■□□□ 1.14
AFF1-205ENST00000504956 PHLPP1O60346 1717 aa22.16■■□□□ 1.14
AFF1-205ENST00000504956 SLC24A1O60721 1099 aa22.15■■□□□ 1.14
AFF1-205ENST00000504956 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
AFF1-205ENST00000504956 PMFBP1Q8TBY8 1022 aa22.14■■□□□ 1.13
AFF1-205ENST00000504956 FBXO41Q8TF61 875 aa22.14■■□□□ 1.13
AFF1-205ENST00000504956 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.13
AFF1-205ENST00000504956 PHF8Q9UPP1 1060 aa22.13■■□□□ 1.13
AFF1-205ENST00000504956 AKAP12Q02952 1782 aa22.12■■□□□ 1.13
AFF1-205ENST00000504956 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
AFF1-205ENST00000504956 DDX17Q92841 729 aaKnown RBP22.12■■□□□ 1.13
AFF1-205ENST00000504956 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
AFF1-205ENST00000504956 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
AFF1-205ENST00000504956 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
AFF1-205ENST00000504956 FOXO3O43524 673 aa22.08■■□□□ 1.13
AFF1-205ENST00000504956 CDCA8Q53HL2 280 aa22.08■■□□□ 1.13
AFF1-205ENST00000504956 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
AFF1-205ENST00000504956 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.13
AFF1-205ENST00000504956 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
AFF1-205ENST00000504956 PUS7Q96PZ0 661 aaKnown RBP22.07■■□□□ 1.12
AFF1-205ENST00000504956 MON2Q7Z3U7 1717 aa22.07■■□□□ 1.12
AFF1-205ENST00000504956 XPCQ01831 940 aaPredicted RBP22.06■■□□□ 1.12
AFF1-205ENST00000504956 NGDNQ8NEJ9 315 aaKnown RBP22.06■■□□□ 1.12
AFF1-205ENST00000504956 PXDNQ92626 1479 aa22.06■■□□□ 1.12
AFF1-205ENST00000504956 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
AFF1-205ENST00000504956 ACEP12821 1306 aa22.05■■□□□ 1.12
AFF1-205ENST00000504956 PLEKHG3A1L390 1219 aa22.05■■□□□ 1.12
AFF1-205ENST00000504956 KIF7Q2M1P5 1343 aa22.05■■□□□ 1.12
AFF1-205ENST00000504956 NPHP3Q7Z494 1330 aa22.05■■□□□ 1.12
AFF1-205ENST00000504956 POLR3AO14802 1390 aaPredicted RBP22.04■■□□□ 1.12
AFF1-205ENST00000504956 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
AFF1-205ENST00000504956 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
AFF1-205ENST00000504956 HSPA1LP34931 641 aa22.03■■□□□ 1.12
AFF1-205ENST00000504956 NRKQ7Z2Y5 1582 aa22.02■■□□□ 1.12
AFF1-205ENST00000504956 NINLQ9Y2I6 1382 aa22.02■■□□□ 1.11
AFF1-205ENST00000504956 PSME1Q06323 249 aa22.01■■□□□ 1.11
AFF1-205ENST00000504956 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
AFF1-205ENST00000504956 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
AFF1-205ENST00000504956 KRT28Q7Z3Y7 464 aa22■■□□□ 1.11
AFF1-205ENST00000504956 SOS2Q07890 1332 aaPredicted RBP22■■□□□ 1.11
AFF1-205ENST00000504956 A0A1W2PP64 1363 aa21.99■■□□□ 1.11
AFF1-205ENST00000504956 CPSF1Q10570 1443 aaKnown RBP21.99■■□□□ 1.11
AFF1-205ENST00000504956 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
AFF1-205ENST00000504956 USP6P35125 1406 aa21.98■■□□□ 1.11
AFF1-205ENST00000504956 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
AFF1-205ENST00000504956 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
AFF1-205ENST00000504956 SHPRHQ149N8 1683 aa21.96■■□□□ 1.11
AFF1-205ENST00000504956 ANKRD36BQ8N2N9 1353 aa21.96■■□□□ 1.11
AFF1-205ENST00000504956 ILDR1Q86SU0 546 aaPredicted RBP21.95■■□□□ 1.1
AFF1-205ENST00000504956 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
AFF1-205ENST00000504956 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms