RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
CDH6-202ENST00000504835 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
CDH6-202ENST00000504835 NOS1P29475 1434 aa13.36□□□□□ -0.27
CDH6-202ENST00000504835 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
CDH6-202ENST00000504835 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
CDH6-202ENST00000504835 CHIC2Q9UKJ5 165 aa13.35□□□□□ -0.27
CDH6-202ENST00000504835 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
CDH6-202ENST00000504835 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
CDH6-202ENST00000504835 IDI1Q13907 227 aa13.34□□□□□ -0.27
CDH6-202ENST00000504835 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
CDH6-202ENST00000504835 KANK1Q14678 1352 aa13.34□□□□□ -0.27
CDH6-202ENST00000504835 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
CDH6-202ENST00000504835 EID1Q9Y6B2 187 aa13.32□□□□□ -0.28
CDH6-202ENST00000504835 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
CDH6-202ENST00000504835 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
CDH6-202ENST00000504835 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
CDH6-202ENST00000504835 ST18O60284 1047 aa13.3□□□□□ -0.28
CDH6-202ENST00000504835 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
CDH6-202ENST00000504835 E9PCH4 1651 aa13.3□□□□□ -0.28
CDH6-202ENST00000504835 UNC13BO14795 1591 aa13.3□□□□□ -0.28
CDH6-202ENST00000504835 KCNA6P17658 529 aa13.28□□□□□ -0.28
CDH6-202ENST00000504835 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
CDH6-202ENST00000504835 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
CDH6-202ENST00000504835 NKTRP30414 1462 aaKnown RBP13.28□□□□□ -0.28
CDH6-202ENST00000504835 RPRD2Q5VT52 1461 aaKnown RBP13.28□□□□□ -0.28
CDH6-202ENST00000504835 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
CDH6-202ENST00000504835 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
CDH6-202ENST00000504835 ANKRD50Q9ULJ7 1429 aa13.27□□□□□ -0.29
CDH6-202ENST00000504835 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
CDH6-202ENST00000504835 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
CDH6-202ENST00000504835 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
CDH6-202ENST00000504835 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
CDH6-202ENST00000504835 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
CDH6-202ENST00000504835 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
CDH6-202ENST00000504835 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
CDH6-202ENST00000504835 SNPHO15079 494 aa13.23□□□□□ -0.29
CDH6-202ENST00000504835 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
CDH6-202ENST00000504835 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
CDH6-202ENST00000504835 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
CDH6-202ENST00000504835 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
CDH6-202ENST00000504835 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
CDH6-202ENST00000504835 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
CDH6-202ENST00000504835 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
CDH6-202ENST00000504835 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
CDH6-202ENST00000504835 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
CDH6-202ENST00000504835 MSH6P52701 1360 aa13.19□□□□□ -0.3
CDH6-202ENST00000504835 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
CDH6-202ENST00000504835 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
CDH6-202ENST00000504835 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
CDH6-202ENST00000504835 BCANQ96GW7 911 aa13.17□□□□□ -0.3
CDH6-202ENST00000504835 PYGBP11216 843 aa13.16□□□□□ -0.3
CDH6-202ENST00000504835 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
CDH6-202ENST00000504835 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
CDH6-202ENST00000504835 ROCK1Q13464 1354 aa13.16□□□□□ -0.3
CDH6-202ENST00000504835 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
CDH6-202ENST00000504835 TBX22Q9Y458 520 aa13.15□□□□□ -0.3
CDH6-202ENST00000504835 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
CDH6-202ENST00000504835 LRP6O75581 1613 aa13.15□□□□□ -0.3
CDH6-202ENST00000504835 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
CDH6-202ENST00000504835 FKBP8Q14318 412 aa13.15□□□□□ -0.3
CDH6-202ENST00000504835 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
CDH6-202ENST00000504835 PTPRUQ92729 1446 aa13.15□□□□□ -0.3
CDH6-202ENST00000504835 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
CDH6-202ENST00000504835 TRPM2O94759 1503 aa13.14□□□□□ -0.31
CDH6-202ENST00000504835 JCADQ9P266 1359 aa13.14□□□□□ -0.31
CDH6-202ENST00000504835 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
CDH6-202ENST00000504835 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH6-202ENST00000504835 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
CDH6-202ENST00000504835 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
CDH6-202ENST00000504835 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
CDH6-202ENST00000504835 NHSL1Q5SYE7 1610 aa13.11□□□□□ -0.31
CDH6-202ENST00000504835 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
CDH6-202ENST00000504835 NUP155O75694 1391 aa13.1□□□□□ -0.31
CDH6-202ENST00000504835 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
CDH6-202ENST00000504835 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
CDH6-202ENST00000504835 KIF1BO60333 1816 aa13.09□□□□□ -0.31
CDH6-202ENST00000504835 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
CDH6-202ENST00000504835 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.32
CDH6-202ENST00000504835 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
CDH6-202ENST00000504835 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
CDH6-202ENST00000504835 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
CDH6-202ENST00000504835 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 ITGAEP38570 1179 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
CDH6-202ENST00000504835 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
CDH6-202ENST00000504835 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
CDH6-202ENST00000504835 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
CDH6-202ENST00000504835 DCCP43146 1447 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 MST1RQ04912 1400 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 ATF3P18847 181 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 GSE1Q14687 1217 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 BRINP3Q76B58 766 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
CDH6-202ENST00000504835 METP08581 1390 aa13.04□□□□□ -0.32
CDH6-202ENST00000504835 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
CDH6-202ENST00000504835 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
CDH6-202ENST00000504835 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms