RNA–Protein interactions for RNA: ENST00000504743.1

ZFYVE28-203, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 4

Gene ZFYVE28, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-203ENST00000504743 ILDR1Q86SU0 546 aaPredicted RBP20.55■□□□□ 0.88
ZFYVE28-203ENST00000504743 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
ZFYVE28-203ENST00000504743 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
ZFYVE28-203ENST00000504743 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
ZFYVE28-203ENST00000504743 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
ZFYVE28-203ENST00000504743 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
ZFYVE28-203ENST00000504743 NWD1Q149M9 1564 aa20.52■□□□□ 0.88
ZFYVE28-203ENST00000504743 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
ZFYVE28-203ENST00000504743 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.88
ZFYVE28-203ENST00000504743 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
ZFYVE28-203ENST00000504743 POGKQ9P215 609 aa20.51■□□□□ 0.87
ZFYVE28-203ENST00000504743 TULP4Q9NRJ4 1543 aa20.51■□□□□ 0.87
ZFYVE28-203ENST00000504743 PTCH1Q13635 1447 aa20.51■□□□□ 0.87
ZFYVE28-203ENST00000504743 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
ZFYVE28-203ENST00000504743 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
ZFYVE28-203ENST00000504743 ROBO2Q9HCK4 1378 aa20.49■□□□□ 0.87
ZFYVE28-203ENST00000504743 PLEKHH1Q9ULM0 1364 aa20.49■□□□□ 0.87
ZFYVE28-203ENST00000504743 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
ZFYVE28-203ENST00000504743 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
ZFYVE28-203ENST00000504743 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
ZFYVE28-203ENST00000504743 TOM1O60784 492 aa20.48■□□□□ 0.87
ZFYVE28-203ENST00000504743 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
ZFYVE28-203ENST00000504743 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
ZFYVE28-203ENST00000504743 SAFB2Q14151 953 aaKnown RBP eCLIP20.46■□□□□ 0.87
ZFYVE28-203ENST00000504743 PUS7Q96PZ0 661 aaKnown RBP20.46■□□□□ 0.87
ZFYVE28-203ENST00000504743 ADGRB2O60241 1585 aa20.44■□□□□ 0.86
ZFYVE28-203ENST00000504743 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
ZFYVE28-203ENST00000504743 MINK1Q8N4C8 1332 aaPredicted RBP20.44■□□□□ 0.86
ZFYVE28-203ENST00000504743 MYOM1P52179 1685 aa20.44■□□□□ 0.86
ZFYVE28-203ENST00000504743 MSH6P52701 1360 aa20.43■□□□□ 0.86
ZFYVE28-203ENST00000504743 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
ZFYVE28-203ENST00000504743 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
ZFYVE28-203ENST00000504743 NCOA3Q9Y6Q9 1424 aa20.38■□□□□ 0.85
ZFYVE28-203ENST00000504743 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
ZFYVE28-203ENST00000504743 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
ZFYVE28-203ENST00000504743 CDK19Q9BWU1 502 aa20.36■□□□□ 0.85
ZFYVE28-203ENST00000504743 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
ZFYVE28-203ENST00000504743 NINLQ9Y2I6 1382 aa20.35■□□□□ 0.85
ZFYVE28-203ENST00000504743 ATF3P18847 181 aa20.35■□□□□ 0.85
ZFYVE28-203ENST00000504743 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
ZFYVE28-203ENST00000504743 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
ZFYVE28-203ENST00000504743 MIER1Q8N108 512 aa20.34■□□□□ 0.85
ZFYVE28-203ENST00000504743 PANK3Q9H999 370 aa20.33■□□□□ 0.85
ZFYVE28-203ENST00000504743 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
ZFYVE28-203ENST00000504743 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
ZFYVE28-203ENST00000504743 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
ZFYVE28-203ENST00000504743 ANP32CO43423 234 aa20.31■□□□□ 0.84
ZFYVE28-203ENST00000504743 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
ZFYVE28-203ENST00000504743 ADGRL3Q9HAR2 1447 aa20.29■□□□□ 0.84
ZFYVE28-203ENST00000504743 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
ZFYVE28-203ENST00000504743 ATP7BP35670 1465 aa20.29■□□□□ 0.84
ZFYVE28-203ENST00000504743 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
ZFYVE28-203ENST00000504743 SLC12A5Q9H2X9 1139 aa20.28■□□□□ 0.84
ZFYVE28-203ENST00000504743 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
ZFYVE28-203ENST00000504743 DCCP43146 1447 aa20.27■□□□□ 0.83
ZFYVE28-203ENST00000504743 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
ZFYVE28-203ENST00000504743 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
ZFYVE28-203ENST00000504743 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
ZFYVE28-203ENST00000504743 USP32Q8NFA0 1604 aa20.25■□□□□ 0.83
ZFYVE28-203ENST00000504743 NUDT16Q96DE0 195 aaKnown RBP20.25■□□□□ 0.83
ZFYVE28-203ENST00000504743 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
ZFYVE28-203ENST00000504743 HSPA1LP34931 641 aa20.24■□□□□ 0.83
ZFYVE28-203ENST00000504743 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
ZFYVE28-203ENST00000504743 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
ZFYVE28-203ENST00000504743 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
ZFYVE28-203ENST00000504743 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
ZFYVE28-203ENST00000504743 CCDC61Q9Y6R9 512 aa20.23■□□□□ 0.83
ZFYVE28-203ENST00000504743 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
ZFYVE28-203ENST00000504743 CABP1Q9NZU7 370 aa20.22■□□□□ 0.83
ZFYVE28-203ENST00000504743 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
ZFYVE28-203ENST00000504743 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
ZFYVE28-203ENST00000504743 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
ZFYVE28-203ENST00000504743 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
ZFYVE28-203ENST00000504743 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
ZFYVE28-203ENST00000504743 ROBO1Q9Y6N7 1651 aa20.21■□□□□ 0.83
ZFYVE28-203ENST00000504743 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
ZFYVE28-203ENST00000504743 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
ZFYVE28-203ENST00000504743 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
ZFYVE28-203ENST00000504743 MST1RQ04912 1400 aa20.19■□□□□ 0.82
ZFYVE28-203ENST00000504743 CCER2I3L3R5 266 aa20.18■□□□□ 0.82
ZFYVE28-203ENST00000504743 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
ZFYVE28-203ENST00000504743 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
ZFYVE28-203ENST00000504743 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
ZFYVE28-203ENST00000504743 RALBP1Q15311 655 aa20.17■□□□□ 0.82
ZFYVE28-203ENST00000504743 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
ZFYVE28-203ENST00000504743 NUTM2FA1L443 756 aa20.16■□□□□ 0.82
ZFYVE28-203ENST00000504743 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
ZFYVE28-203ENST00000504743 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
ZFYVE28-203ENST00000504743 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.81
ZFYVE28-203ENST00000504743 C1orf167Q5SNV9 1468 aa20.14■□□□□ 0.81
ZFYVE28-203ENST00000504743 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
ZFYVE28-203ENST00000504743 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
ZFYVE28-203ENST00000504743 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
ZFYVE28-203ENST00000504743 NSD2O96028 1365 aa20.12■□□□□ 0.81
ZFYVE28-203ENST00000504743 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
ZFYVE28-203ENST00000504743 ESCO1Q5FWF5 840 aa20.11■□□□□ 0.81
ZFYVE28-203ENST00000504743 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
ZFYVE28-203ENST00000504743 NRKQ7Z2Y5 1582 aa20.11■□□□□ 0.81
ZFYVE28-203ENST00000504743 ACEP12821 1306 aa20.1■□□□□ 0.81
ZFYVE28-203ENST00000504743 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms