RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
RFC1-207ENST00000504554 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
RFC1-207ENST00000504554 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
RFC1-207ENST00000504554 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
RFC1-207ENST00000504554 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
RFC1-207ENST00000504554 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
RFC1-207ENST00000504554 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
RFC1-207ENST00000504554 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
RFC1-207ENST00000504554 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
RFC1-207ENST00000504554 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
RFC1-207ENST00000504554 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
RFC1-207ENST00000504554 TOM1O60784 492 aa11.91□□□□□ -0.5
RFC1-207ENST00000504554 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
RFC1-207ENST00000504554 METP08581 1390 aa11.91□□□□□ -0.5
RFC1-207ENST00000504554 HSPA1LP34931 641 aa11.9□□□□□ -0.5
RFC1-207ENST00000504554 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
RFC1-207ENST00000504554 SETBP1Q9Y6X0 1596 aa11.9□□□□□ -0.5
RFC1-207ENST00000504554 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
RFC1-207ENST00000504554 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
RFC1-207ENST00000504554 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
RFC1-207ENST00000504554 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
RFC1-207ENST00000504554 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
RFC1-207ENST00000504554 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
RFC1-207ENST00000504554 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
RFC1-207ENST00000504554 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
RFC1-207ENST00000504554 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
RFC1-207ENST00000504554 ATMINO43313 823 aaPredicted RBP11.87□□□□□ -0.51
RFC1-207ENST00000504554 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
RFC1-207ENST00000504554 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
RFC1-207ENST00000504554 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
RFC1-207ENST00000504554 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
RFC1-207ENST00000504554 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
RFC1-207ENST00000504554 KIF1BO60333 1816 aa11.86□□□□□ -0.51
RFC1-207ENST00000504554 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
RFC1-207ENST00000504554 HRCP23327 699 aa11.85□□□□□ -0.51
RFC1-207ENST00000504554 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
RFC1-207ENST00000504554 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
RFC1-207ENST00000504554 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
RFC1-207ENST00000504554 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
RFC1-207ENST00000504554 PPLO60437 1756 aa11.82□□□□□ -0.52
RFC1-207ENST00000504554 MSH6P52701 1360 aa11.82□□□□□ -0.52
RFC1-207ENST00000504554 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
RFC1-207ENST00000504554 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
RFC1-207ENST00000504554 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
RFC1-207ENST00000504554 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
RFC1-207ENST00000504554 MAP3K13O43283 966 aa11.81□□□□□ -0.52
RFC1-207ENST00000504554 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
RFC1-207ENST00000504554 ROBO2Q9HCK4 1378 aa11.8□□□□□ -0.52
RFC1-207ENST00000504554 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
RFC1-207ENST00000504554 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
RFC1-207ENST00000504554 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
RFC1-207ENST00000504554 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
RFC1-207ENST00000504554 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
RFC1-207ENST00000504554 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
RFC1-207ENST00000504554 ASXL1Q8IXJ9 1541 aa11.79□□□□□ -0.52
RFC1-207ENST00000504554 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
RFC1-207ENST00000504554 NUBP1P53384 320 aa11.78□□□□□ -0.52
RFC1-207ENST00000504554 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
RFC1-207ENST00000504554 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
RFC1-207ENST00000504554 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.52
RFC1-207ENST00000504554 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
RFC1-207ENST00000504554 C7P10643 843 aa11.77□□□□□ -0.53
RFC1-207ENST00000504554 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
RFC1-207ENST00000504554 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
RFC1-207ENST00000504554 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
RFC1-207ENST00000504554 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
RFC1-207ENST00000504554 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
RFC1-207ENST00000504554 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
RFC1-207ENST00000504554 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
RFC1-207ENST00000504554 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
RFC1-207ENST00000504554 ATF3P18847 181 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 ILDR2Q71H61 639 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
RFC1-207ENST00000504554 STK26Q9P289 416 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 MST1RQ04912 1400 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 MYOM2P54296 1465 aa11.75□□□□□ -0.53
RFC1-207ENST00000504554 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
RFC1-207ENST00000504554 LRPPRCP42704 1394 aaKnown RBP11.74□□□□□ -0.53
RFC1-207ENST00000504554 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
RFC1-207ENST00000504554 DCCP43146 1447 aa11.73□□□□□ -0.53
RFC1-207ENST00000504554 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
RFC1-207ENST00000504554 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
RFC1-207ENST00000504554 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
RFC1-207ENST00000504554 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
RFC1-207ENST00000504554 TECPR2O15040 1411 aa11.72□□□□□ -0.53
RFC1-207ENST00000504554 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
RFC1-207ENST00000504554 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
RFC1-207ENST00000504554 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
RFC1-207ENST00000504554 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
RFC1-207ENST00000504554 TIE1P35590 1138 aa11.71□□□□□ -0.53
RFC1-207ENST00000504554 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
RFC1-207ENST00000504554 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
RFC1-207ENST00000504554 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
RFC1-207ENST00000504554 SIN3AQ96ST3 1273 aa11.69□□□□□ -0.54
RFC1-207ENST00000504554 ADGRB1O14514 1584 aa11.69□□□□□ -0.54
RFC1-207ENST00000504554 ORAI2Q96SN7 254 aa11.68□□□□□ -0.54
RFC1-207ENST00000504554 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
RFC1-207ENST00000504554 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms